Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1984 |
Symbol | |
ID | 3671736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2074296 |
End bp | 2074886 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637710683 |
Product | TetR family transcriptional regulator |
Protein accession | YP_315742 |
Protein GI | 74318002 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCA CGCCCGCAAA GGTCCCATCG GGAGAGGTCT ACGAGCGCAT CGTCGACGCG GCGCTACGCC TTTTCACCGA GCGCGGCTAC TTCAATACGA CAGTGCCCGA TGTCGCGCGC GCCGCGCAAG TCAGCGTCGG CTCGATCTAC CACCATTTCA AGGATAAAGA AGACGTCGCG CGGGCGCTGT ATCTCGACTT GATCGCGCGC ATGCAGCAGG CGCTGACCGA GATCGCGGGC GGGCACGCGA GCGCGCACGA CCGTTGCCGG GCGGTGATGG CGATGCTGTT CGAGCTGACC GAATCGGATC GCGACGCCAT GGATTTCATG CTCTACGCGA AGCATCGGGA CTTCCTTCCT TCCGAGCGGC CGGTCTGTTC TTCCAAGCCT TTCGAGACCA TGCGCAAATT CGTTCAGGAA GGCATGGCGC GCGGCGAGAT CCGCGGAATG GACGTCATGG TGGCGACGTC CTGCCTTTTC GGCGGCGCCA TCCGACTGAT TACCGCGCGG CTCGACGGGG TTCTCGCCGA GCCGCTGCCC GCAAAGCTCG ACGAGGTCTG GGCCTGTGCC TGGCGTGGGA TCGCCGCCTA A
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Protein sequence | MARTPAKVPS GEVYERIVDA ALRLFTERGY FNTTVPDVAR AAQVSVGSIY HHFKDKEDVA RALYLDLIAR MQQALTEIAG GHASAHDRCR AVMAMLFELT ESDRDAMDFM LYAKHRDFLP SERPVCSSKP FETMRKFVQE GMARGEIRGM DVMVATSCLF GGAIRLITAR LDGVLAEPLP AKLDEVWACA WRGIAA
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