| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1972 |
|---|
| Symbol | |
|---|
| ID | 3671724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2062238 |
|---|
| End bp | 2063650 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637710671 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_315730 |
|---|
| Protein GI | 74317990 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCT ATCACGACAT TGCCGAGCAC ACAGAGAAAC TGATCGTCGA CGGCGTGCTG
CGCGCGGGCG ACCGCCTGCC TTCGGTGCGC CAGGCCTGCC GCATCCATGA TGTGAGTCCC
GTTACCGTCA CGCAGGCTTA CTACCTGCTG GAGAGCCGCG GCCTGATCGA GGCGCGGCCG
AAGTCGGGCT ATTTCGTGCG CGCGCGGCTC CGGCAGAACC TGCGCGAGCC GGACATGACG
CGCCCGGTCG CCAGCTCGAC ACAGTTGCAG GTCAGCGATT TCATTTTCCA GATTCTCGAA
AGCGTCCGCG ATCCGTCGGT CGTGCCGCTG GGTTCGAGCT TCCCGAGCCC GTTTCTGTTT
CCGCTCGACA AGCTCGGGCG TTTTCTGGCG AGCGCCGCAC GCAAGCTCGA CCCGCTCGCC
ACGGTCATCG ACCTGCCGCC CGGAAACGAG GAGTTGCGGC GGCAACTGGC CTTGCGCTAC
CTCGCGTCCG GCGCGTCCGT TTCGCCCGAC GAAATCGTCA TCACGTGCGG CGCGATGGAG
GCGCTCAACC TCTGTCTGCA GGCGGTCGCC CGGCCCGGCG ACCTGATCGC CATCGAATCG
CCGGCCTTTT ACGCCGGGCT GCAGGCGAGC GAGCGGCTCG GGTTGAAGGT GATCGAAATC
CCGACCCACC CGCGCGAGGG CATCAGCATG GCCGCCCTGG CGGAGACGCT GCAGCGCCAT
CCGGTCAAAG CCTGCCTGTT CATGCTCAAT TTCTCGAATC CGACAGGCAG CCTCGTTCCG
GACGAGCGGA GAAAGGAACT CGTCGAATTG CTGCATCGTC ACGACGTGCC GCTCATCGAA
GACGACGTCT ACGCGGAGCT TTATTTCGGC CGCCAGGCGC CCTTGTGCAC CAAAGCCGTG
GATCCGCACG GGATGGTGAT GCACGTTTCG TCGTTCTCGA AAAATCTCGC GCCCGGATAC
CGCGTAGGCT GGGTCGCGGC CGGGCGCTTC GCCGAGCGCG TCCAGCGGCA AAAATTCTCG
ACGACGCTGG CGACGACGAT TCCCGTGCAA ATCGCGCTCG CGGAATATCT GAAACACGGC
GGCTACGAGA ACCACCTGCG GCACTTGCGG CGCAAGCTCG CCGAACAGGA AGCCGCACTG
GCCGCGGCGA TCGAGCCGAA TTTTCCGGAA GGCACGCGCC TGGCGCGGCC CGACGGCGGC
TATTTCCTGT GGCTGGAACT ACCGCCGCAG ATCGACACGC TGGTCTTGCA TCAACGCACG
CTGGCGCGAG GCATCAGCAC CGCGCCCGGC CCCATTTTTT CGGCGAAGCG GGAATTCACC
CACCATCTGC GGCTGAATTT CGGCCATTCG GACTCGCAGC GCCAGCAGGA TGCGATGGTG
ACGCTGGGGC AATTGATCGC CGAACAGTTA TAG
|
|---|
| Protein sequence | MSRYHDIAEH TEKLIVDGVL RAGDRLPSVR QACRIHDVSP VTVTQAYYLL ESRGLIEARP
KSGYFVRARL RQNLREPDMT RPVASSTQLQ VSDFIFQILE SVRDPSVVPL GSSFPSPFLF
PLDKLGRFLA SAARKLDPLA TVIDLPPGNE ELRRQLALRY LASGASVSPD EIVITCGAME
ALNLCLQAVA RPGDLIAIES PAFYAGLQAS ERLGLKVIEI PTHPREGISM AALAETLQRH
PVKACLFMLN FSNPTGSLVP DERRKELVEL LHRHDVPLIE DDVYAELYFG RQAPLCTKAV
DPHGMVMHVS SFSKNLAPGY RVGWVAAGRF AERVQRQKFS TTLATTIPVQ IALAEYLKHG
GYENHLRHLR RKLAEQEAAL AAAIEPNFPE GTRLARPDGG YFLWLELPPQ IDTLVLHQRT
LARGISTAPG PIFSAKREFT HHLRLNFGHS DSQRQQDAMV TLGQLIAEQL
|
|---|
| |