Gene Tbd_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1948 
Symbol 
ID3674058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand- 
Start bp2042950 
End bp2043615 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID637710647 
Productputative flavodoxin reductase 
Protein accessionYP_315706 
Protein GI74317966 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.175846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACG CCGTCAAGCT TCTCATGACC CAGTTCGTCA CCCATGACGT GAAGCGCTTC 
ATCGTCAGCA AGCCGCCGGG GTTTTCCGTC ATGCCGGGCC AGGGCGTCGA ACTCGCGATC 
GATCGACCCG GCCTGCGCGA GCAGCGCCGG CCTTTCACGC CGACCGGGCT CGCGGCGGAC 
GCGGTGCTCG AATTCACGAT CAAGGGCTAC CCAAGCCACG CCGGCGTGAC CGACGCGCTG 
CACCGGCTGG AACCCGGTGC GGAAATGCTG ATGTCGGAGC CTTTCGGCAC GATCCAGTAC 
AAGGGGCCGG GCGTGTTCGT CGCGGGCGGC GCCGGCATTA CGCCTTTTCT CGCGATCCTG 
CGCGAACGTG CGCACCGGGG CGAGCTCGCC GGTCAGACCC TGATCTTCTC GAACAAGACG 
CCGGGCGACG TGATCTGCGA AAAGGAATTG CGGCATCTGC TAGGCGAGCG CTGCCTCCTG 
CTGACGACCG CGGCGGATGC ACCGGGGTAC GCGCATCGGC GCATCGATCG CGCTTTTCTC 
GAAGAAACGA TTGACGACTT CACGCAGAAT TTCTATGTCT GCGGACCGCC GCCTTTCATG 
GAAGCCGTCA ACGGCGCGCT GACCGATCTC GGCGCGCGGG CGGAGAGCCT GGTGTTCGAA 
CAGTAA
 
Protein sequence
MDHAVKLLMT QFVTHDVKRF IVSKPPGFSV MPGQGVELAI DRPGLREQRR PFTPTGLAAD 
AVLEFTIKGY PSHAGVTDAL HRLEPGAEML MSEPFGTIQY KGPGVFVAGG AGITPFLAIL 
RERAHRGELA GQTLIFSNKT PGDVICEKEL RHLLGERCLL LTTAADAPGY AHRRIDRAFL 
EETIDDFTQN FYVCGPPPFM EAVNGALTDL GARAESLVFE Q