Gene Tbd_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1943 
Symbol 
ID3674053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2037426 
End bp2038271 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID637710642 
Productputativel formate transporter 
Protein accessionYP_315701 
Protein GI74317961 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.466004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.753963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATATC TGGTGCCTTC CGAATTTGTG ACGAAGATGG TGGACGCGGG CGAGGCCAAG 
GTCTTCATGG CGACGCGCGA TACGCTGATC CGGGCCTACA TGGCCGGCGC GATCCTCGCG
CTCGCCGCGG TCTTCGCGGT CAGCATGACG GTGCAGACCG GCTCGCCGCT GGTCGGCGCG
CTGCTGTTCC CGGTCGGCTT CGTGATGCTC TATCTGATGG GCTTCGATCT CTTGACCGGG
GTGTTCGTGC TGACGCCGCT CGCGCTGATC GACAAGCGCC CCGGGGTGAC GGTGAAGGGC
ATTCTGCGCA ACTGGGGGCT CGTCTTCGCC GGCAACTTCG CCGGCGCGTT GACCGTCGCG
GTCATGATGG CGATCGTCTT CACCTACGGC TTCTCGGTCG AACCCAACGA CGTTGGCCAG
AAGATCGCAG GCATCGGCGA AGCGCGCACG CTCGGCTACA AGGATTACGG CGCGGCCGGG
ATGCTGACGC TCTTCATCCG CGGCATGCTG TGCAACTGGA TGGTGTCGAT GGGCGTCGTC
GGCGCGATGA TCTCGACGAC GGTCACCGGC AAGGTGATCT CGATGTGGAT GCCGATCATG
CTGTTCTTCG CGATGGCGTT CGAGCATTCG GTGGTCAACA TGTTCCTGTT CCCGTCGGGA
CTGATCCTGG GCGGCAATTT CTCGGTCATG GACTACCTGA TCTGGAACGA GATCCCGACC
GTGCTCGGCA ATCTGGTCGG CGGCCTTGCG TTCACCGGTC TCACGCTCTA CACGACGCAC
CTCCGGACCG CGCCCAAGCG GGTGTCTTAC CCGGTCAAGG CCGACGCCGA GCGCGCCTAC
AATTGA
 
Protein sequence
MAYLVPSEFV TKMVDAGEAK VFMATRDTLI RAYMAGAILA LAAVFAVSMT VQTGSPLVGA 
LLFPVGFVML YLMGFDLLTG VFVLTPLALI DKRPGVTVKG ILRNWGLVFA GNFAGALTVA
VMMAIVFTYG FSVEPNDVGQ KIAGIGEART LGYKDYGAAG MLTLFIRGML CNWMVSMGVV
GAMISTTVTG KVISMWMPIM LFFAMAFEHS VVNMFLFPSG LILGGNFSVM DYLIWNEIPT
VLGNLVGGLA FTGLTLYTTH LRTAPKRVSY PVKADAERAY N