Gene Tbd_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1940 
Symbol 
ID3674050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2033998 
End bp2034924 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content64% 
IMG OID637710639 
Producthypothetical protein 
Protein accessionYP_315698 
Protein GI74317958 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00288] conserved hypothetical protein TIGR00288 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA CAGACACGCA CAACTTCGCC GTTTTCTGCG ATTTCGAAAA CGTCGCGATC 
GGCCTCAAGG AAGGCAATTA CCCGGATTTC AAGATACGCC CGGTGCTCGA ACGCCTGCTT
CTCAAGGGCA GCATCGTCGT CAAGAAAGCG TATTGCGACT GGGACCGCTA CAAGGAATAC
AAGCGCGACA TGCACGAAGC CGCGTTCGAG CTGATCGAGA TCCCGCACGT GCGCCAGTCG
GGCAAGAACT CGGCCGACAT CCGCATGGTC GTCGACGCGC TCGACCTCTG CTACACCAAG
GCGCACATCG ACGCCTTCGT CATCATCAGT GGCGATTCCG ATTTCTCGCC GCTCATCTCC
AAGCTCAAGG AGAACGGCAA GAGCGTGATC GGTATCGGCG TGCGTGGCTC GGCGTCGTCG
CTCCTGATCA GCAACTGCGA CGAGTTCATC TTTTACGAAG ATCTTGTGCA GCCCAAGGCC
CGGCCCACGC GGCCGGCGAA GAAGGCGCCG AGCGAGAAAG TCGCTGTTCC GCCGCAGCCC
GCGAAGGAGG TGGAGACGGG CGCGGCGGCC AAACCAGCGA CGACGACCCG CCGGCGCGGA
CGTCCCGCTG TCGCGCAGGC TGCCGATGCC GTCGAGGCTG CGCCGGCCGC CGAGCCGACG
CCCGAAGAAC AGAAAACCCG GGCGATCGAA ATCGTCGTCG GCACGCTCGA ACAACTGGTC
GCCGAGCGCG GCGAAGGCGC GATCTCGGCC TCGCTGATCA AGAACACGAT CAAGCGCATC
CAGCCCGGCT TCAGCGAGTC GCAGTACGGC TACAGCGCGT TCGGAAAGAT CCTCGACGAC
GCGCACAAGC GCGGCGCCCT CGTGGTGGAC AAGAAAGAGG GCGGCGCGGT CCTGGTAAGC
CTGCCGCCTG CCCGGGGCGA GTCCTGA
 
Protein sequence
MAATDTHNFA VFCDFENVAI GLKEGNYPDF KIRPVLERLL LKGSIVVKKA YCDWDRYKEY 
KRDMHEAAFE LIEIPHVRQS GKNSADIRMV VDALDLCYTK AHIDAFVIIS GDSDFSPLIS
KLKENGKSVI GIGVRGSASS LLISNCDEFI FYEDLVQPKA RPTRPAKKAP SEKVAVPPQP
AKEVETGAAA KPATTTRRRG RPAVAQAADA VEAAPAAEPT PEEQKTRAIE IVVGTLEQLV
AERGEGAISA SLIKNTIKRI QPGFSESQYG YSAFGKILDD AHKRGALVVD KKEGGAVLVS
LPPARGES