| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1921 |
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| Symbol | leuD |
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| ID | 3674031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2017942 |
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| End bp | 2018580 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637710620 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_315679 |
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| Protein GI | 74317939 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.691189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGCAT TCACGACCCT GGACGGGCTG GTCGTGCCGC TCGACCGCGC CAACGTCGAC
ACCGACGCGA TCATTCCCAA GCAGTTCCTG AAGTCGATCA AGCGCGCGGG CTTCGGCCCC
AACCTGTTCG ACGAATGGCG CTACCTCGAT CACGGCGAGC CCGGCATGGA CCCGGCGACG
CGCCAGCCCA ATCCGGCGTT CGTGCTCAAT CTCCCGCGCT ACGCCGGTGC CTCGGTGCTG
CTCGCGCGCG ACAACTTCGG CTGCGGCTCG AGCCGCGAGC ACGCGCCATG GGCGCTCGAG
GACTACGGCA TCCGCGCGAT CATCGCACCG AGTTTTGCCG ACATCTTTTA CAACAACTGC
TTCAAGAACG GCATCCTGCC GATCGTGCTC GACGCCGCCG CAGTCGACCG CCTGTTCGGC
GAATGCGAGG CGAGCGCGGG CTACCGCCTC AAGATCGACC TCGAGCAGCA GACCGTGACG
ACGCCGGGCG GCGAGGTGCT GCGCTTCGAG GTCGATGCCG GGCGCAAGCA CCGGCTGCTC
AACGGCCTCG ACGACATCGG CCTGACGCTT CTGCAGGCCG ACAAGATCAA GGCCTACGAA
GCGCGGCGCA GGCAGGAAGC GCCGTGGTTG TTTGCGTGA
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| Protein sequence | MQAFTTLDGL VVPLDRANVD TDAIIPKQFL KSIKRAGFGP NLFDEWRYLD HGEPGMDPAT
RQPNPAFVLN LPRYAGASVL LARDNFGCGS SREHAPWALE DYGIRAIIAP SFADIFYNNC
FKNGILPIVL DAAAVDRLFG ECEASAGYRL KIDLEQQTVT TPGGEVLRFE VDAGRKHRLL
NGLDDIGLTL LQADKIKAYE ARRRQEAPWL FA
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