Gene Tbd_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1912 
Symbol 
ID3674022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2008026 
End bp2008892 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content66% 
IMG OID637710611 
Productacetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 
Protein accessionYP_315670 
Protein GI74317930 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.493914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGT TCCAGAAAAT CCTGCCGCCC AAGATCAAGC GTCGCGCGCA GACGTCGAAG 
ACCATGCCCG AGGGCCTGTG GTCGAAGTGC CCGGCGTGCA ACGAGGTGCT CTACCGCGCC
GACCTCGAAA GCAACCTCGA GGTCTGTCCG AAGTGCGGCC ATCACCACCG CATCGGCGCG
CGAGCGCGGC TCGCGATGCT GCTCGACGGC GAGGGCCAGC ACGAGATCGG CGCCCACGTC
ACGCCGCTCG ACCCGCTCAA ATTCAAGGAC AGCAAGAAAT ACCCCGATCG CCTCAAAGAG
GCGCAAACCG GAACCTCGGA AACCGACGCG CTCGTCGTGA TCGGCGGCAG CGTCAAGGCC
GTGCCGGTCG TCGCGGCGGC CTTCGAATTC AAGTTCATGG GCGGTTCGAT GGGTTCGGTC
GTCGGCGAGC GTTTCGTCCA GGGCGTCGAG GCCGCGATCG AGTCGAACTC GGCCTTCGTC
TGCTTCTCGG CGAGCGGTGG CGCTCGCATG CAGGAGGGCC TGTTCTCGCT GATGCAGATG
GCCAAGACCT CGGCCGCGCT GACCCAGTTG TCGCGCAACC GGCTGCCCTT CGTTTCGGTG
CTGACCGACC CGACGATGGG TGGCGTTTCC GCCAGCTTCG CGATGCTCGG CGACCTGATC
GTCGCCGAGC CGAACGCGCT GATCGGCTTT GCCGGTCCGC GCGTGATCGA GCAGACCGTG
CGCGAGACCC TGCCCGAGGG CTTCCAGCGT GCCGAATTCC TGCAGGAGAA GGGCGCGGTC
GATCGCATCA TTGACCGCCG CCAGATGCGC GACGACCTGG CTGCCACGCT TGCGATCATG
ATGGGACGCC CGGCGCTTGC CGCCTAG
 
Protein sequence
MSWFQKILPP KIKRRAQTSK TMPEGLWSKC PACNEVLYRA DLESNLEVCP KCGHHHRIGA 
RARLAMLLDG EGQHEIGAHV TPLDPLKFKD SKKYPDRLKE AQTGTSETDA LVVIGGSVKA
VPVVAAAFEF KFMGGSMGSV VGERFVQGVE AAIESNSAFV CFSASGGARM QEGLFSLMQM
AKTSAALTQL SRNRLPFVSV LTDPTMGGVS ASFAMLGDLI VAEPNALIGF AGPRVIEQTV
RETLPEGFQR AEFLQEKGAV DRIIDRRQMR DDLAATLAIM MGRPALAA