Gene Tbd_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1905 
Symbol 
ID3674015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2001387 
End bp2002130 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID637710604 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_315663 
Protein GI74317923 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGCAA AACCGGGTGC GGGCCGGGCC TTCTTCGTCG CCGACCTCCA TCTGACCGAC 
GACCGCCCGC GCGCGACCGA GCGTTTCTTC CGTTTTCTCG AGGAAGAGGT TGCGGGCGCG
GATGCGCTCT ACATCCTCGG CGACCTGTTC GAGGCCTGGA TCGGCGACGA TCACGACGAG
CAGGTCGCGA CGGCGACCGC GCAGCACCTG AAGGCGCTCG CCGAAGCCGG CACCCGCGTA
TATTTCATGC ACGGCAACCG TGATTTCATG CTGGCCGGCC GCTACGCCGG GCAGGCCGGC
ATGACGCTGT GCGCCGACCC CACGCGGATC GACCTCTACG GCACGCCAAC ACTGCTCACG
CACGGGGACA CGCTTTGCAC CGACGATACG GCCTATCAGG CGTTCCGCCG GCGCGTGCGT
CATCCGCTTA CGCTCGCGCT GCTGCGACGG CTGCCGCGCG GGCTGCGCAA CCGTCTCGCC
CGCGGCGCCC GTGCCGGGAG CCAGGCGGCG AAAGCCCGCA AGCCGGTGCA GACCATGGAC
GTCAATGCCG ACGCCGTCGT CGACGCATTG CGCAGCCACG CGGTCACGCG CCTGATCCAC
GGCCACACCC ATCGCCCCGC TCGGCACGTG CACGAGCTCG ACGGCCAGCA GTGCGAGCGC
TGGGTGCTTC CCGACTGGTA CGCGCGCTGG GGCTACGTCG TCTGCGACGC GGCCAGATGC
ACGCTGCGGG TCGAGGACTT ATGA
 
Protein sequence
MGAKPGAGRA FFVADLHLTD DRPRATERFF RFLEEEVAGA DALYILGDLF EAWIGDDHDE 
QVATATAQHL KALAEAGTRV YFMHGNRDFM LAGRYAGQAG MTLCADPTRI DLYGTPTLLT
HGDTLCTDDT AYQAFRRRVR HPLTLALLRR LPRGLRNRLA RGARAGSQAA KARKPVQTMD
VNADAVVDAL RSHAVTRLIH GHTHRPARHV HELDGQQCER WVLPDWYARW GYVVCDAARC
TLRVEDL