Gene Tbd_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1904 
Symbol 
ID3674014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2000887 
End bp2001378 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID637710603 
Productpeptidyl-prolyl cis-trans isomerase B 
Protein accessionYP_315662 
Protein GI74317922 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC TGCATACGAA TCACGGCACC ATCACACTCG AACTCGACGC CGAGAAGGCT 
CCCAAGACCG TCGAGAATTT TCTCCAGTAC GTCCGTGACG GCTTCTTCGA CGGCACGATC
TTCCACCGTG TGATCGACGG ATTCATGATC CAGGGCGGCG GCTTCGAGCC GGGCCTCGCG
CAGAAACCGA CGCGCGACGC GATCGAGAAC GAAGCCTCCA ACGGCCTCAA GAACGACGCC
TATACCGTCG CGATGGCGCG CACGCCGAAC CCCAATTCGG CCACCGCGCA GTTCTTCATC
AACGTCGCCA ACAACAGCTT CCTGAACTTC ACTTCGCCGA CCCCGCAGGG CTACGGCTAT
GCCGTCTTCG GCAAGGTCGT CGAGGGGACC GACGTCGTCG ACAAGATCAA GAAGGTCAAG
ACCGGAAGCC GCGGCGGCCA CCAGGACGTG CCGCTGGAAG ACGTCGTCAT CACGAAGGCC
GAAATCATCT GA
 
Protein sequence
MVKLHTNHGT ITLELDAEKA PKTVENFLQY VRDGFFDGTI FHRVIDGFMI QGGGFEPGLA 
QKPTRDAIEN EASNGLKNDA YTVAMARTPN PNSATAQFFI NVANNSFLNF TSPTPQGYGY
AVFGKVVEGT DVVDKIKKVK TGSRGGHQDV PLEDVVITKA EII