| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1897 |
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| Symbol | |
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| ID | 3674007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1994288 |
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| End bp | 1995649 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637710596 |
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| Product | putative Outer membrane protein |
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| Protein accession | YP_315655 |
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| Protein GI | 74317915 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTCA AAACCCTGAC AAGCACTCTC CTGGCGGCCG GCGTCCTGCT GGCCGCTTCT
TCGGCCCACG CGGAAACGGT CAACCTGCAG CAGGCCGTCG CCATGAGCCT CGCCGCCGAT
CCGCGCGTCA AGGAACGCGA ACAGGTGGTC GAGGCCGCGC GTGCGCTGCT CGAAGAGGCG
AAGGGCAACG CCGGCTGGCG CATCAGCGCC AACGCCTTCA TCGGGCTCGC GCCCGAGGTC
GAGGGCGGCT TCTATCAGGG TGGCGCGTAC AGCGGCACGG TGCCGCGCAC CGACGGCGAC
AACCTCGACG GCGTGTCGGA CTGGACCCAC CTCGATTTCG CGCTGATCAA GCCGCTCTTC
ACCTTCGGCA AGATCGAACA CTACGGCGAG GCGGCCCAAG GCAACGTCGA CGTCAAGCGC
GGCGAACTCA GCAAGACGCA GGGCGACATC GTCTATGACA CCAAGCGCGC CTACTTCGGC
TATCTGACGG CGCGCGACAT CCGGGTGTTC CTCGAGGACA TCCAGTCGCG GCTCGACCGC
GCGATCGCCT CGGTCGACCG CAACCTCAAG GAAGAGAATG GCGAGTCGAA GCAGTCCGAC
CTCTATGCCC TGCAGACGGC GAAGGGCCTG CTGTCGAAAT ACGTGCATCA GTCGCGGGCG
ATCGAGAAAG TCAGTCTCGA CGGCCTCAAG GTGCTGACCG GGGTCGGCCT GAAGACGGAA
CTCGCCGTGG TCGACGAGCG TATCGCGCCC GTGCCGTTTC CGCAGGTCGA ACTCGCCGAC
CTGCACGCGC GCGCCCTGCA GGATCGCCCC GAAATGCGCC AGCTCGAGGC CGGGCTGCGC
GCCCGGCGCG CGCTCGTCGC CGCGAAGAAG GCGGATCGCA TGCCGAACGT CTACGCGGGC
GTGATCGGGC AGTTCAACTA CGCGTCCAAC CGTGAACGGC TCGACAACCC CTATCTCACC
GACCCCTTCA ACGGCGGCGG GCTGACCCCG GTCGTCGGCG TGAAATGGGA CTCGGTCTTC
GGCGTCACCG ACGCGCGCAT CAACCAGGCC CAGGCTGAAC TCGAAGCGCT CAACCACAAG
AAGGCCTTCG CGGTGTCGGG CATCCCCTTC GAGGTCAGCG AGGCCTACGT CAACGCCAAA
GCCAACCTCG ACGCCCAGCA GGAACTCGCC GAGGGGGCCA CGGCGGCGCG GCGCTGGATG
ATCGCTTCGC TGGCCGACCT GTCGGCGGGA ATCGAAAGTG CCGGAACGGT GGCCGATGCG
ATCCGCAACT ACGTTCTGGT GCATACCGAA TATCTGCGCA CCGTGAACGA CTACAACATG
AACGTCGCGC AGCTTGCCCG GCTGACCGGT GAACTCCGCT AA
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| Protein sequence | MMLKTLTSTL LAAGVLLAAS SAHAETVNLQ QAVAMSLAAD PRVKEREQVV EAARALLEEA
KGNAGWRISA NAFIGLAPEV EGGFYQGGAY SGTVPRTDGD NLDGVSDWTH LDFALIKPLF
TFGKIEHYGE AAQGNVDVKR GELSKTQGDI VYDTKRAYFG YLTARDIRVF LEDIQSRLDR
AIASVDRNLK EENGESKQSD LYALQTAKGL LSKYVHQSRA IEKVSLDGLK VLTGVGLKTE
LAVVDERIAP VPFPQVELAD LHARALQDRP EMRQLEAGLR ARRALVAAKK ADRMPNVYAG
VIGQFNYASN RERLDNPYLT DPFNGGGLTP VVGVKWDSVF GVTDARINQA QAELEALNHK
KAFAVSGIPF EVSEAYVNAK ANLDAQQELA EGATAARRWM IASLADLSAG IESAGTVADA
IRNYVLVHTE YLRTVNDYNM NVAQLARLTG ELR
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