Gene Tbd_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1883 
Symbol 
ID3673993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1981981 
End bp1983099 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content59% 
IMG OID637710582 
Producthypothetical protein 
Protein accessionYP_315641 
Protein GI74317901 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.31705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG GTATGGCGCA CAATTCGAAT GCGGTCGCCG ACGACCACGC AGGTGCCGAC 
TGGCTGCTGC CTCGGCGCCG CCACCCCTAT TACATCGTCG CGCCCCGGTA TGTGAGAATG
TCCGCCGGAA TCAAGGTGCT ACATCTGCTC TGCCATGCGC TCAATCGGGC GGGAGAGCGT
GCCTATCTCA TTACACATCC CTACTGTTTG CCGCAGTACG CCACGCACCC GGAATTGATC
ACGCCGGTTC TAACCAGGGC GACCCTCGAG CATGATTTCG CTTCAGGGTT GGCGCCCATC
GTTGTCTATC CGGAAACTGT GCACGGTAAT CCTTTCAACG CGCCCTTCGT GGTGCGCTAT
GTCCTTAATT TTCCCGGCTT GCTGGGCGGC GACTTTCAGT ATGACGAAGA CGAATTCTGT
ATCGCCTATT CGGAAAATCT TGCCGGATCC ATCCCTTCCG CTCGGCTGAC GCTGTTCGTG
CCCGCGTCCG ACCCGCAGAC ATTTAGCCCC GTCCCGGAGC AGGAGCGGCG GGGCACCTGC
TTCTACGCGG GAAAATATAA GTATCACCAT GGCGGTGAAT TGTTCGATAT CACACGCGAC
AGCACTGAGA TCACGCGAGA CCTCCCCGAT TCGCCCACGC AGCCACAGAT CGCGGACCTC
TTTCGCAGGT CTGAGCTCTT ATATTGTTAC GAGAACAGCG CCCTCGCCAT CGAGGCGCTA
CTGTGCGGCT GCCCGGTGGT CTTTCTCCCC AACCCGTATT TCGACCGGGT GATCGCGGCC
GAGGAGCTTG GGTGGGACGG AATCGCATGG GGCACGGACC CTGACGAGAT TGCCCGTGCC
AAACACACTG TCCACTTGGC GCGAGATAAT TTCCTGCACC ATTTCGATGT CTTCTACGAA
GCGCTCGGGG AATTCATTGC GTCGACGCAG TCAGAGGCGG ACGGGCGCCG GTACGAGACG
CCCATTGCAG TGCCTTACCT GCGCGACACG AACCTCGTCC TCAAGATCGG CGGTGTTCTT
GAGATCGTCC GCTCCTTCTA CCAGCAAAAG GGCGGCCTGA AGACGGCGGG ACAAGTACTT
AAGCGGATCA GTCAGCGTGG GCTCCGTTTT TTTCCGTGA
 
Protein sequence
MNAGMAHNSN AVADDHAGAD WLLPRRRHPY YIVAPRYVRM SAGIKVLHLL CHALNRAGER 
AYLITHPYCL PQYATHPELI TPVLTRATLE HDFASGLAPI VVYPETVHGN PFNAPFVVRY
VLNFPGLLGG DFQYDEDEFC IAYSENLAGS IPSARLTLFV PASDPQTFSP VPEQERRGTC
FYAGKYKYHH GGELFDITRD STEITRDLPD SPTQPQIADL FRRSELLYCY ENSALAIEAL
LCGCPVVFLP NPYFDRVIAA EELGWDGIAW GTDPDEIARA KHTVHLARDN FLHHFDVFYE
ALGEFIASTQ SEADGRRYET PIAVPYLRDT NLVLKIGGVL EIVRSFYQQK GGLKTAGQVL
KRISQRGLRF FP