Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1865 |
Symbol | |
ID | 3671530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1960927 |
End bp | 1961331 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637710564 |
Product | pilus assembly protein |
Protein accession | YP_315623 |
Protein GI | 74317883 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCGG GAAGACAAAA CGGATTCACG TTGATCGAAC TGATGATTAC GGTGGCGATC GTCGGCATTC TGGCGTCGAT CGCCTATCCG GGGTATCAGA AATACATGCT CTCGGCGCGC CGTGCCGACG CGCAGGCCGA CCTGCTCAAG ATACAGCTCG GGCTCGAGAA GTGGCGGGCG AATCACAACA CCTACTCGAG CAACCTCGCT GACGCCGGTT TTTCCGACAA CAATCCCTAT TACGGCTACA GCATCACGGT CGGCAGCGCC ACCGCCACCA GCGCCAGCGC CTATACCGTC ACGGCGACCG CCACCGGCGC CCAGGCCAAC GACAGCGGCT GTACGTCGCT CGCGATCAAC CAGAGCGGCA ACAAAACACC CGCTTCGGGC TGCTGGACGA AATAG
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Protein sequence | MKSGRQNGFT LIELMITVAI VGILASIAYP GYQKYMLSAR RADAQADLLK IQLGLEKWRA NHNTYSSNLA DAGFSDNNPY YGYSITVGSA TATSASAYTV TATATGAQAN DSGCTSLAIN QSGNKTPASG CWTK
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