Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1860 |
Symbol | |
ID | 3671525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1954347 |
End bp | 1955273 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637710559 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_315618 |
Protein GI | 74317878 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCA CCGTTCTGCT CGCCAATCCG CGCGGCTTCT GCGCCGGCGT CGACCGCGCG ATCGCGATCG TCGAACGCGC GCTGGAAAAA TTCGGCGCAC CGATCTACGT GCGCCACGAA GTCGTCCACA ACACCTTCGT CGTCGACGAC CTCAAGCGCA AGGGTGCCGT TTTTGTCGAG GAACTGTCCG AGGTGCCGGC CGGCGCGACC GTCATTTTCA GTGCACACGG CGTGTCTCAA GCTGTGCGCA CTGAAGCCGC AGCCCGCGGG CTGACCGTGT TCGACGCGAC CTGCCCGCTT GTCACCAAGG TCCACGTCGA AGTCAGCAAG ATGCGCGACA AGGGATACGA GATCGTGATG ATCGGCCACA AAGGACACCC CGAGGTCGAA GGCACGCTCG GCCAGTCCGC CGGCGGCATG TACCTCGTCG AGACGCCCGG CGACGTCGCG ACGCTCGAGG TAACGAATCC CGACTGCCTC GCCTACGTTA CCCAGACTAC ACTCTCGGTC GACGACGCCG CACGCGTGGT CGATGCCCTG CGCGCGCGCT TCCCCACGAT CACGGGGCCA AAGAAGGACG ACATCTGTTA TGCGACGCAA AACCGCCAGG ATGCAGTGAA GCATCTGGCG TCGCAGTGCG ACGTCGTCAT CGTCGTGGGA TCGCCGACCA GTTCGAATTC GAACCGCCTG CGGGAGGTCG CGGAGAACCT GGGGATAGCG GCCTACATGG TCGACAATGC CGACGAGATC GACCCGCGGT GGGTATCGGG AAACCAACGC GTCGGCGTGA CCGCCGGGGC GTCGGCACCC GACGTGCTGG TGCGGGCAGT GATCGATCGC CTGGAACGAC TGGGGATATG TTCGGTGAGC GAGCTCGATG GGGTGCAGGA GAAGGTCGGA TTCCCTCTGC CGAGAGAGTT GGCGTAA
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Protein sequence | MTPTVLLANP RGFCAGVDRA IAIVERALEK FGAPIYVRHE VVHNTFVVDD LKRKGAVFVE ELSEVPAGAT VIFSAHGVSQ AVRTEAAARG LTVFDATCPL VTKVHVEVSK MRDKGYEIVM IGHKGHPEVE GTLGQSAGGM YLVETPGDVA TLEVTNPDCL AYVTQTTLSV DDAARVVDAL RARFPTITGP KKDDICYATQ NRQDAVKHLA SQCDVVIVVG SPTSSNSNRL REVAENLGIA AYMVDNADEI DPRWVSGNQR VGVTAGASAP DVLVRAVIDR LERLGICSVS ELDGVQEKVG FPLPRELA
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