Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1834 |
Symbol | |
ID | 3671499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1932987 |
End bp | 1934177 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637710533 |
Product | putative protease |
Protein accession | YP_315592 |
Protein GI | 74317852 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.308143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATAC GGAAATTCTG GTTGCTTTTT GCCCAGTCGG TGACGGTCGC ACTCGGCGCG CTCGTCGTCG TCGCGCTCTT CAAACCCGAT TTGCTGCAAT GGCGTGCCCA GACCCCGAAT CTCACGATCC AGCAGGCCCG TCCCCAAGGC GGCGGCACGG TCACCGTCGC GCCCAATGAG TCCTTCGCGC TGGCGGCGCA AAAGGTCATT CCATCGGTGG TCAACGTGTT CACGCAGCAA AAGGTCCGCA ACCCTGCGCA TCCTGCGATG CAGGATCCGA TTTTTCGCTA CTTCTTCGGT GATCGGCTCG ACGCGCGGCC GCGCGAGGTG TCCAACCTCG GCTCGGGGGT CATCGTCACG ACCAACGGCT ACATCCTGAC CAACCACCAC GTCGTCGATG CCGCGGACCA GATCGAGGTC GCCCTTGCCG ACGGCAAGAC CGTGCCGGCG CGGGTGATCG GCGCGGACCC CGAGACCGAC CTCGCCGTCC TCAAGATCGA TGCGGAAAAG CTGCCGGCGA TCACCTTCGC CAACGCCGAC AGCCTCAAGG TCGGCGACTG GGTGCTCGCG GTCGGCAACC CCTTCGGCGT TGGCCAGACC GTGACCGCGG GCATCGTGAG TGCACTCGGC CGGACCCGGT TGGGCATCAA TACTTTCGAG AACTTCATTC AGACCGACGC GGCGATCAAC CCGGGCAACT CGGGCGGCGC GCTCGTCGAC TCGGCGGGTA ACCTGGTCGG GGTGAACAGC GCGATCTACT CGCGCACGGG CGGCTCGCAA GGCATCGGCT TCGCGATTCC GGTCAGCATC GCCCGTCAGG TGATGGAACA GATCATCAAG TCCGGCAGCG TGACCCGCGG CTGGGTAGGG GTCGAGGTGC AGGACCTGAC GCCGGAGCTC GCCGAGTCGT TCAACCTGCC CGACGTCAAC GGCGCCTTGA TCGCCGGGGT TCTCAAGGGC GGGCCTGCCG ATACCGGCGG GGTGCGGCCC GGCGACATTC TGCTCGCGGT CAACGGCCGC AGGGTGACCG ACTCGGCGTC CCTGCTCAAC CTGATCGCGG AACTCACGCC CGGCCAGAGC GCGCGACTGA CCGTCGCCCG CAAGCAGCGC TCGCTCGATC TCAAGGTCGA GGTGGGACGG CGGCCGCTGC AGCGCGCCCT GCCGATGCCG CCCGAGCCGG CGCTCGAATA A
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Protein sequence | MHIRKFWLLF AQSVTVALGA LVVVALFKPD LLQWRAQTPN LTIQQARPQG GGTVTVAPNE SFALAAQKVI PSVVNVFTQQ KVRNPAHPAM QDPIFRYFFG DRLDARPREV SNLGSGVIVT TNGYILTNHH VVDAADQIEV ALADGKTVPA RVIGADPETD LAVLKIDAEK LPAITFANAD SLKVGDWVLA VGNPFGVGQT VTAGIVSALG RTRLGINTFE NFIQTDAAIN PGNSGGALVD SAGNLVGVNS AIYSRTGGSQ GIGFAIPVSI ARQVMEQIIK SGSVTRGWVG VEVQDLTPEL AESFNLPDVN GALIAGVLKG GPADTGGVRP GDILLAVNGR RVTDSASLLN LIAELTPGQS ARLTVARKQR SLDLKVEVGR RPLQRALPMP PEPALE
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