Gene Tbd_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1801 
Symbol 
ID3671465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1903189 
End bp1904571 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content64% 
IMG OID637710499 
Productundecaprenyl-phosphate galactosephosphotransferase 
Protein accessionYP_315559 
Protein GI74317819 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC ACAACCAGTG GCTGTTTCGG CAGCAGCTTT CCGTCGTATC CCTGACCAAA 
ATCCTGCTCG ACCCCTTGGT GGCCGTGCTG GTGTTGATGG CCTGGACCTT CTATTTCGGC
GAGGCTTTCC GTGGACCGTA CCCGGTTCTC GCCCTCATCG TCTTTACGCT GACCTTTCCC
GGCAAGTGGC CGGAAGTGTC CCTGCGCGCC TTCTGGAACG AAGTGGTCAT GCCGTGGTTT
TTCCTTTCGG GCCTGATCCT GCTGTTCGGC TATTCCAGCG GCTACCTCGA TTTCTTCCCG
CCCAATCTCG TCATGGCGTG GATGGTGTCG ACACCCGTGG CGATGTACGT CGCGCACCGC
GTGGTGCGGC GCATCCTGCC GCGCCTGCTG TTGCTCGAAG GCGGTCGCCG CCGCGCGATC
GTCGTCGGCG CGGGACATCT CGGCACAGAA CTGCACGGGC GCTTTGCGAG CGACGGCGCG
CTGGGCGTCG ACGTCATGGG CTTCTTCGAC GACCGCGCGC TCGACCGCAC CGAGCTCGTC
GACCCGACCC GCCTGCTCGG CAAGCTCGGG GAGATTCCGG AATACGTCAA TCGGAACGGC
ATCGATCTGG TGTACATCAC GCTGCCGATG GCGTCGCAGC CGCGCACGCT GACGCTGCTC
GACGCCCTGA GGGACACCAC GGCCTCGGTC TACTTCGTCC CGGACATATT TGTCTCGGAT
CTGATCCAGG CACGGGTCGA CCACATCCAC GGCATGCCCG TCGTTGCGCT GACCGAAACG
CCCACCCTCG GCGTCAGCGG CATCGGCAAG CGGATCAGCG ACGTCGTCAT CGCAAGCCTG
ATCCTGCTCA TGATCTGGCC CATCCTGCTC GTGCTCGCGC TCGGCGTGAA GCTCTCGTCC
CCGGGGCCGA TCATCTTCAA GCAGCGACGC TACGGCCTCG ACGGCCAGGA AATCCTCGTC
TACAAGTTCC GCTCGATGCG CGTCTGCGAC GACGGCGAAG TCATCAAGCA GGCCGGCCGC
AGCGACCCGC GCATCACCCG CTTCGGCGCC TTCATCCGCC GCACCTCGCT CGACGAACTG
CCCCAGTTCA TCAACGTCCT GCAGGGCCGC ATGAGCGTCG TCGGCCCGCG CCCGCACGCC
GTCGCCCACA ACGAGCAGTA CCGCAAGCTC ATCAAGGGCT ACATGCTCCG CCACAAGGTC
AAGCCCGGCA TCACGGGTTG GGCGCAAGTC AACGGCCTGC GCGGCGAGAC CGAAACCCTC
GACAAGATGC GCGCGCGTAT CCAGTACGAC ATCGACTACA TGCGCAACTG GTCGCTCATG
TTCGACCTCA TGATCATCGG CAAGACCCTC GCCGTCGTCT GGCGGGACCA GAACGCCTAC
TGA
 
Protein sequence
MTNHNQWLFR QQLSVVSLTK ILLDPLVAVL VLMAWTFYFG EAFRGPYPVL ALIVFTLTFP 
GKWPEVSLRA FWNEVVMPWF FLSGLILLFG YSSGYLDFFP PNLVMAWMVS TPVAMYVAHR
VVRRILPRLL LLEGGRRRAI VVGAGHLGTE LHGRFASDGA LGVDVMGFFD DRALDRTELV
DPTRLLGKLG EIPEYVNRNG IDLVYITLPM ASQPRTLTLL DALRDTTASV YFVPDIFVSD
LIQARVDHIH GMPVVALTET PTLGVSGIGK RISDVVIASL ILLMIWPILL VLALGVKLSS
PGPIIFKQRR YGLDGQEILV YKFRSMRVCD DGEVIKQAGR SDPRITRFGA FIRRTSLDEL
PQFINVLQGR MSVVGPRPHA VAHNEQYRKL IKGYMLRHKV KPGITGWAQV NGLRGETETL
DKMRARIQYD IDYMRNWSLM FDLMIIGKTL AVVWRDQNAY