| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1796 |
|---|
| Symbol | |
|---|
| ID | 3671460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1897435 |
|---|
| End bp | 1898679 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637710494 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_315554 |
|---|
| Protein GI | 74317814 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03014] exopolysaccharide biosynthesis operon protein EpsL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.721357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGCGGG AGACCGTGCA GCGCGGATGC GAGCCGCGCC GCGAAAAGGT CGGGCGCGGA
CGGCGCGACG GGATGCTGTT GTTTGCGGGG GTGGGAGTTG CTGCGCTGTA TGCGCTGCCA
GGCCTCGCGG CGGAAGGTGA TACTTTCAGC CCCTTCGTCT CCTACACGCG TTACTACGAC
AGCAATCTCT ATCGCCTCGA CGACAACGAG TCTTCCCTCG TGCCCGACAA GTCCGACCAG
TACAACGTTT TGACCGCCGG GCTCAATGTC GACTGGCGTC CCGGCCGGCA GCAGGTGCTC
GCAAAGGCGA GCAAGAGCCT CGTCCGGTTT TCGCGCTACG ACCATCTCGA TTATGACGGC
TCGGATTACC AACTGCGTTG GAACTGGCGA CTCGGAAACC ACCTGTCCGG CGGGATCGGC
GGGACAGAAA AGGTGACGCA GTCCAACCTC GGAAATCAAG GAGGGGTACC GGTGAACAAC
GAGGTCACGC TGCGACGTGG CTTTGCGGAC GGTGCATGGC AGTTTCATCC ACGCTGGAGC
GTCGGAGCCG GCGCCGCAAC CGTCGAGTCG ACCAACAGCG TGTTGACGCT CCTGGACTAC
GAAGAGGATA GCGTTCACGC GACGCTTGGC TACAAGACGC CAAAAGGAAG CAAGCTGAGT
GGGCAACTGC GTCGGGCGGA GGGCGAATAC CCGAATCGCC CCGTGTCCTC CACGCTGGAT
CGGGAATACA CGCAGACCGA GTACAACCTG CTCGGGGATT GGACCTTGAC CGGCAAGCTC
ATCGCGCACG GGAAGATCGG TTATGTCCAA CGCGAACACG ATACGCGGGC ACAACGGGAC
TTTTCCGGCG TTGCCGGCCG CCTGTCCGCC GACTACATGC TCACGGGGAA GACGACGCTC
AACGCGGCGA TCTACCGCGA AGTGGCGAAC TCCGACCGCG ACGATGCAAC GTATCAGATC
AATACCGGGA CGAGTCTCGG TGCGGCTTGG CGCGCGACGT CGAAAATCAC TGTCCGCGGG
AACGCCGCGT TCGAGAACCG TCAGTTCGAG GGCGATCCTG GCGGCCCGCT TGTCGGCGAC
CAACGTGACG ACGACACCGT GTCCGGCTCG CTTTCCGTCG GTTACAGCCC GATAGAGGCC
GCAACGATCG AACTCGGTGT CCAGGCGGGA AAACGTGATT CCAACATCAC AGGATACGGA
TATGACTTTC ACGCTGTCTT CCTGAGCGTG AGAGGGGACT TTTGA
|
|---|
| Protein sequence | MPRETVQRGC EPRREKVGRG RRDGMLLFAG VGVAALYALP GLAAEGDTFS PFVSYTRYYD
SNLYRLDDNE SSLVPDKSDQ YNVLTAGLNV DWRPGRQQVL AKASKSLVRF SRYDHLDYDG
SDYQLRWNWR LGNHLSGGIG GTEKVTQSNL GNQGGVPVNN EVTLRRGFAD GAWQFHPRWS
VGAGAATVES TNSVLTLLDY EEDSVHATLG YKTPKGSKLS GQLRRAEGEY PNRPVSSTLD
REYTQTEYNL LGDWTLTGKL IAHGKIGYVQ REHDTRAQRD FSGVAGRLSA DYMLTGKTTL
NAAIYREVAN SDRDDATYQI NTGTSLGAAW RATSKITVRG NAAFENRQFE GDPGGPLVGD
QRDDDTVSGS LSVGYSPIEA ATIELGVQAG KRDSNITGYG YDFHAVFLSV RGDF
|
|---|
| |