Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1795 |
Symbol | |
ID | 3671459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1896480 |
End bp | 1897274 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637710493 |
Product | polysaccharide export outer membrane protein |
Protein accession | YP_315553 |
Protein GI | 74317813 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | [TIGR03028] polysaccharide export protein EpsE |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGT TGTGGCGTAC CGTTTGTGCG ATGTGTTTGA TGTTGCTGGC ACCGCCGGCG CTGAGCGGGG ATACCGATTA CCGCATGGGT GTCGGTGATG TGGTGAGGAT CACTGTATAT GGGCAGCCCG ACCTCACCAC CGATGCTCGG GTGAGCGCAA AGGGCAACAT CAGTTTTCCC TTGATCGGCG AGGTTAAGCT CGCAGGTACA ACACCCGCTG AAGGGGAGCG GGAGATTGCC AGCCGCCTCA GCAAAGGCGG GTTCGTCGTG CAGCCCTTCG TCACGCTGAA CGTCGTGCAG TACCGCGGCC AGCAGGTCTC CGTTTTGGGG CGGGTGAACC GCCCGGGCAA ATATCCCCTG GAGAAAGCGG GCCGCGTCAG CGACGCGCTC GCCTTGGCAG GCGGCATCCT CCCCGACGGC GCCGACGTCA TCACGCTGGT TCGTGAGCGC GACGGCAAGA TCGAATATCG CCAGATCGAT GTGCTTGCGT TGTTTAACCC AGGTGGAGAC CCCAACAATG TCGTGGTTCA GGACGGCGAC ATCATCAACG TCGCGCGCCA GCCTATGTTC TACATCTACG GCGAAGTGCA GCGACCCGGT GCTTTCAGGC TCGAGCAGAA CATGACGCTC ATGCAGGCTC TCTCGATGGG CGGCGGCCTC ACGCCGCGCG GGACGCAGCG CGGGATCCGG ATCATGCGGC GAGACGACAA GGGAGCGGTG CGAGAAGTCA GCGGGGAACT GGGTGACCTC GTGAAACCCG ACGACGTCAT CTACGTCAAG GAAAGCCTGT TCTAA
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Protein sequence | MMKLWRTVCA MCLMLLAPPA LSGDTDYRMG VGDVVRITVY GQPDLTTDAR VSAKGNISFP LIGEVKLAGT TPAEGEREIA SRLSKGGFVV QPFVTLNVVQ YRGQQVSVLG RVNRPGKYPL EKAGRVSDAL ALAGGILPDG ADVITLVRER DGKIEYRQID VLALFNPGGD PNNVVVQDGD IINVARQPMF YIYGEVQRPG AFRLEQNMTL MQALSMGGGL TPRGTQRGIR IMRRDDKGAV REVSGELGDL VKPDDVIYVK ESLF
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