Gene Tbd_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1788 
Symbol 
ID3671452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1888342 
End bp1888953 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content52% 
IMG OID637710486 
Producthypothetical protein 
Protein accessionYP_315546 
Protein GI74317806 
COG category[S] Function unknown 
COG ID[COG3379] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.933014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGAG GTTACTGGGT GAATGAAAAA ATGAGATTGT TGGTCATCGG AATTGATGGT 
GCGGATAGGC GAGTCGTTGA CGGCATGCCG ATGCCTTTTT TGCAGCGGTT GTTGGCCGAC
GGCACTCATT ACTTCGCTGA GGTGGATTTA TTCAGCAGAG GGTGGGCCGA AATATTTACG
GGCAAGCATG GGATTGATAC TGGGGCCTTC TACAACCGAC CCGCCTGTAC CGGCAGGTAT
GAATTTACCC AGCATTTCAA TTTGAATTCA TTGGACGCAA ACCGCACTGT CCGCCCTATC
TGGCAGGATC TAAACGATAA AGGTTTTCGG GTAGGCGTCA TGAATATACC GACTACATTA
CCCGCTCCGC CCGTGGAGGG TTTTTTCGTG GCAGGGGCGG GGGGGGGGGA GCGAGAAAAG
CGGCAGCAGT TCCATCCCCC CGGAGGCCTG CTACCCGCCG GGGATAATGC AAACTCTGGA
ATCCCTAGGC TATATCGGAG ATGTTCGAAG GGGTGCGAGC GGAATAACCG ATTTGGAAAG
TTTTTTCCAG ATTATAAAAG CCATGGAGGA AAGACGCACG GCAAGCTTTA TTCAGCTCGC
CCAGGAACAT AA
 
Protein sequence
MDRGYWVNEK MRLLVIGIDG ADRRVVDGMP MPFLQRLLAD GTHYFAEVDL FSRGWAEIFT 
GKHGIDTGAF YNRPACTGRY EFTQHFNLNS LDANRTVRPI WQDLNDKGFR VGVMNIPTTL
PAPPVEGFFV AGAGGGEREK RQQFHPPGGL LPAGDNANSG IPRLYRRCSK GCERNNRFGK
FFPDYKSHGG KTHGKLYSAR PGT