| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1778 |
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| Symbol | |
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| ID | 3671442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1877813 |
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| End bp | 1878355 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637710476 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_315536 |
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| Protein GI | 74317796 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0725323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCG TCAAGACCTC GCTTCCGGAA GTCCTCTTGC TCGAGCCCAA GGTCTTCGGC
GACGCCCGTG GCTTCTTTCT CGAGAGCTGG AATCGCAAGA CGTTTTCCGC GCTGGGCCTG
GACGTCGACT TCGTGCAGGA CAACCATTCG CGGTCGGCGC GCGGCGTGCT GCGCGGCCTG
CATTACCAGA TCAAGGATCC GCAGGGCAAG CTCGTGCGTG TCGTGAACGG CTCGGTTTTC
GACGTCGCGG TCGATCTGAG GCGCGCGTCG CCGAATTTCG GCCGCTGGGT GGGTTACGAG
CTGTCGGCCG AAAATCAGAG AATGCTGTGG ATTCCGCCCG GCTTCGCCCA TGGCTTTCTG
GTGTTGTCCG AGAGCGCAGA CTTTCTTTAC AAGACGACCG CGTATTACGC GCCTGAGTGG
GACCGGGGCG TGTGCTGGAA CGATCCCGAA ATCGGCATCG AGTGGCCATG GAGCGGCTCG
CCGACCCTCT CGGCCAAGGA CCAGGTCTTG CCCTTTCTCA AGGACGCCGA GGTCTACGCG
TGA
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| Protein sequence | MNVVKTSLPE VLLLEPKVFG DARGFFLESW NRKTFSALGL DVDFVQDNHS RSARGVLRGL
HYQIKDPQGK LVRVVNGSVF DVAVDLRRAS PNFGRWVGYE LSAENQRMLW IPPGFAHGFL
VLSESADFLY KTTAYYAPEW DRGVCWNDPE IGIEWPWSGS PTLSAKDQVL PFLKDAEVYA
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