| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1771 |
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| Symbol | |
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| ID | 3671760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1869715 |
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| End bp | 1871412 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710469 |
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| Product | exonuclease RecJ |
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| Protein accession | YP_315529 |
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| Protein GI | 74317789 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.495895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.722264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCGA TCACCACGCG CCCCTGTCCG ACGGAAGTCT GCGCCGCACT CGAGCAGGCG
GGGCTCGCCC CGGCCTGGGC CCGGCTCTAT GCCGCCCGCG GCGTCAGCCA CCCCGATCAG
ATCGCGCACC GTCTGCCTCA ATTGCTGCCG CCGACGGCGA TGCTGAATAG CGACCGCGCC
GCGCGACTGC TCGCCGACGC GATCGAGGCG CACAAGAAGC TCCTCATCGT CGGCGACTAC
GATGCCGACG GCGCGACCGC CTGCGCGCTC GGCGTACGCG GCTTGCGCAT GCTCGGCGCC
CGCGTCGACT ATCTCGTGCC CAACCGGCTC GAGCACGGCT ACGGCCTGAC GCCCGACATC
GTGAGAATCG CCGCCGCGCG GCAACCCGAT CTGCTGATCA CCGTCGACAA CGGCATTGCG
GCGGTCGAGG GCGTCGCCGC GGCGAACGCG CTGGGTATTC CGGTCCTCGT GACCGACCAC
CACCTTCCCG GGGACGCGCT GCCCGACGCC GCCTGCATCG TCAATCCGAA TCAGCCGCAC
TGCGCCTTCC CGTCGAAAAA TCTCGCCGGT GTCGGCGTCA TGTTCTACGT CCTGCTGGCG
CTGCGCGCCG AACTGCGGCG GCGCGGCGCC TACGAACAGG TCGCCGAGCC CGATCTGCGC
GTGCTGCTCG ACCTTGTCGC GCTTGGCACG GTCGCCGACG TCGTCAGGCT CGACGCCAAC
AATCGCACGC TGGTCGCGCA GGGGCTCGCC CGCATGCGCG CGGGCCTCGC CTGCCCGGGC
ATCGCTGCAC TGTTCCAGGC GGCGGGCCGC GAACCCGCAC GTGCGACGGT ATTCGACCTC
GGCTTCATGC TCGGCCCCAG ACTGAACGCC GCCGGGCGCA TCGACGACAT GGCGCTCGGC
ATCGAATGCC TGTTGGCCGA CAGCCCATCG GCCGCGCAGC AGCTCGCGCA GCGCCTCGAC
GCGTTGAACC GGGCCCGGCG CGACGTCGAA GCAGACATGC TCGACGAAGC GCTCGCAATA
CTCGCGCGCT TCAGCCCGAG CGACAGCTAC AGCCTCACCG CCTACCAGCC CGACTGGCAC
ATCGGCGTCA TCGGCATCCT GGCGTCGCGC CTCAAGGACA AGTTCCATCG GCCGACCGTC
GTCCTGGCGG CGAGCGAGAG CGGCGAACTC AAGGGGTCGG GACGTTCGAT TCCCGGCCTG
CACCTGCGCG ATGCACTCGA TCTGGTCGAC AAGCGCCATC CCGGGCTCAT CCTGAAATTC
GGCGGACACG CAATGGCCGC CGGCCTCAGC ATCGCCGCCG GTCGCCAAGA GGAATTCGCG
CACGCATTCG AAGCGGTCGT GCGCGGCCTC ATCGACCCCG CCGACCTCGA GGGAGTGATA
GAAACCGACG GCGAACTCGA ACTCGCGGAA CATCGCTACG AACTCGCGCT CGAACTCGAG
CATGCCGTAT GGGGCCAGGG CTTCCCGGCA CCGCTGTTCA CCGGCGTCTT CGACGTGGCC
GCGCAGCGCG TCGTCGGCGA CAAGCATCTG AAGCTGACGC TTGCGCGCGA CGGCAATGCG
TTCGAGGCCA TGCGTTTTTT TCAGTCCGAC CCGCTGCCGG AGCGCATACA CGCCGTCTAC
GCACTGATGC CCAACGAGTT CAACGGGCGG CGCACGCTTC AGCTCAAACT CCAGCACTGG
GAACCTGCAG CCCCGTGA
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| Protein sequence | MPSITTRPCP TEVCAALEQA GLAPAWARLY AARGVSHPDQ IAHRLPQLLP PTAMLNSDRA
ARLLADAIEA HKKLLIVGDY DADGATACAL GVRGLRMLGA RVDYLVPNRL EHGYGLTPDI
VRIAAARQPD LLITVDNGIA AVEGVAAANA LGIPVLVTDH HLPGDALPDA ACIVNPNQPH
CAFPSKNLAG VGVMFYVLLA LRAELRRRGA YEQVAEPDLR VLLDLVALGT VADVVRLDAN
NRTLVAQGLA RMRAGLACPG IAALFQAAGR EPARATVFDL GFMLGPRLNA AGRIDDMALG
IECLLADSPS AAQQLAQRLD ALNRARRDVE ADMLDEALAI LARFSPSDSY SLTAYQPDWH
IGVIGILASR LKDKFHRPTV VLAASESGEL KGSGRSIPGL HLRDALDLVD KRHPGLILKF
GGHAMAAGLS IAAGRQEEFA HAFEAVVRGL IDPADLEGVI ETDGELELAE HRYELALELE
HAVWGQGFPA PLFTGVFDVA AQRVVGDKHL KLTLARDGNA FEAMRFFQSD PLPERIHAVY
ALMPNEFNGR RTLQLKLQHW EPAAP
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