| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1760 |
|---|
| Symbol | |
|---|
| ID | 3671345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1853501 |
|---|
| End bp | 1854181 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637710452 |
|---|
| Product | lipoprotein releasing system, ATP-binding protein |
|---|
| Protein accession | YP_315518 |
|---|
| Protein GI | 74317778 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.585377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAA CCGTGCTGCG CTGCAGCGGG CTCGGCAAGA CATTCCGCCA GGGCAAGGTC
GACGTGCCGG TGCTGCGTTC GGTCGACCTT GCGGTCGGCA CCGCGGAGTC GCTCGCTATC
GTTGGCGCGT CGGGTTCCGG CAAGAGCACC TTGCTGCATC TTCTCGGCGG ACTCGACACG
CCGACGCGCG GCGACGTCGC GCTTCTCGGA AAAAACCCGT TCGCGCTTTC GGAGGCCGAG
CGCTGCAGGC TGCGCAACAC CGCACTCGGC TTCGTCTATC AGTTTCATCA TCTGCTGCCG
GAATTTTCGG CGGTGGAAAA TGCGGCGATG CCGCTCATCA TCCGGCGCGT CGCGCGTGCG
GAGGCCTTGG CGCGCGCCGC GGAAGTGCTC GACGCGGTCG GGCTGACGCA TCGCCTCGCT
CATCGCCCCG GTGAACTGTC GGGCGGCGAG CGTCAGCGGG TCGCGATCGC GCGTGCGGTC
GTGACACGTC CGGCATGCAT CCTCGCGGAC GAACCGACCG GCAACCTGGA CCACCACACG
GCCGACACGG TGTTCGATCT CATGCGCGAG CTCAACCGCA AACAGGGCAC GAGCCTCGTC
GTCGTCACCC ACGACGTCGA GCTCGCCGCG CGCATGGATC GACAGTTGCG CCTCGTCGAC
GGGACATTGC AGGCGGCGTA A
|
|---|
| Protein sequence | MNETVLRCSG LGKTFRQGKV DVPVLRSVDL AVGTAESLAI VGASGSGKST LLHLLGGLDT
PTRGDVALLG KNPFALSEAE RCRLRNTALG FVYQFHHLLP EFSAVENAAM PLIIRRVARA
EALARAAEVL DAVGLTHRLA HRPGELSGGE RQRVAIARAV VTRPACILAD EPTGNLDHHT
ADTVFDLMRE LNRKQGTSLV VVTHDVELAA RMDRQLRLVD GTLQAA
|
|---|
| |