| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1758 |
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| Symbol | |
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| ID | 3671343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1848989 |
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| End bp | 1851157 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637710450 |
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| Product | GTP diphosphokinase, RelA/SpoT protein |
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| Protein accession | YP_315516 |
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| Protein GI | 74317776 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.76617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA TTGTCCGCCC GCGCTGCTAC GAAGCGACCG ACCGCGAGTC GGCGCGGCAA
GCCCTCGCAC GCGTGCTGCC CGTTGCCGAA AACGATCTGC CCTGGCGCGC GCTCGACTAC
GCCTACGAGC GGCTCGGCGG CAGCGAGGCG TTCGCGCACA GCGTGGGCAG TGCACTGATC
GCCGCCGAAC TCAAGGTCGG TGCCGACGCG GTGGCGGCGG CGCTGCTGCA CGCCTGTCTT
GGTGACGAGG CGGAGATGGA TGAGCGCTTC AACAGCGCTG CCCAGCTCGC GCGCGGGGTC
GCGGCGATGG CCCGCATCGA GTCGCTGGCC GCCACGACGA CCGACAAACG CATCGATCCC
CACGCCCAGC TCGAAGCCTT GCGTCAGATG GTGCTGGCGA TGGTCGAGGA CATTCGCGTG
GTGTTGCTGA AGCTCGCCGA GCGTACCCAC GCGCTGCGTT GCGCCGCGTC GCCCGCGCCG
GAGGGCGACG ACCCCGACGA ACGCGCGGCG CTGCGCGAGG CGCTCGGCCA ACAGGCCCGC
GAGCTCTTCG CCCCGCTGGC CAACCGTCTC GGCGTGTGGC AGATCAAGTG GGAGATGGAG
GACTGGGCCT TCCGCTACCT CGAACCGGAA ACCTACCGCA CGATCGCCGC GCAACTCGAC
GAAAAGCGCG CCGATCGCGA GGCCTACATC CTCGGGATCA TCGAACGCCT GAAGGCCGAA
CTGGCGCTGC ACGGCATCGA GGCCGAGGTG ACGGGCCGGC CCAAGCACAT CGCGAGTATC
GTCAACAAGA TGCGGCGCAA GCATCTGAGC TTCGAGCAGT TGTACGACAT CCGTGCCGTG
CGCGTCCTGG TGCGCCAGGA AATCGACTGC TACACCGTGC TCGGCCTCGT GCACAACCTG
TGGCAGCCGA TTCCCGGTGA GTTCGACGAT TACATCTCGC AGCCCAAGAG CAACGACTAC
CGCTCGCTTC ACACCGCGGT CATCGGGCCC GAGGATCGCG CGCTCGAGGT GCAGATACGC
ACCTTCGACA TGCATCGCCA CGCCGAACTC GGTGTCGCGG CGCACTGGCG CTACAAGGAA
AGCGGCAAGC AGGACGCGCA GTACGAGGAG AAGATCGCGT GGCTGCGGCG CATCCTCGAA
TGGAAGGACG ACGTCGCCGA CAGCAGCGAA TTCCGCGAGC AGTTCAAGAC CGAGCTCTTC
CACGACCAGG TCTATGTGCT GACGCCGCAG GGGCGGGTCG TCGCGCTCGA CCGCGGCGCG
ACCCCGGTGG ATTTCGCCTA CGCCGTGCAT ACCGATCTCG GCCATCGCTG CCGCGGCGCG
AAGGTCAACG GCGCGATGGT CCCGCTCAAC ACGGTTCTCG ACAACAGCCA GCGCGTCGAG
ATCGTGACCG CCAAGGAAGG CACGCCGAGC CGCGACTGGC TCAATCCGGC ACTTGGCTAT
CTCGCGACGC ATCGCGCGCG GTCGAAGGTG CGGGCGTGGT TCCGTCAGCG CGACGTCGGC
GAGCAGGTGA ACCTCGGCCG CAGCCTGCTC GACAAGGAAC TCAAGCGCCT CGGCGTCGGC
GACGTGAACC ACGAAAAGCT CGCCCAGCGC CTCAAGTTTT CCAGTGTCGA CGAGTTCTTC
GCCGCGCTCG GGCGCGGCGA CGTCGGCCAG CGCGATCTGG TCGGCGCGCT ACAGGAGCCG
GGCAAGGCGC CCCCAGCGCT TGCGCCGACG GCCAAGCCGC GGTCCCGTCC GGGCTCGGGC
AGCCCGGTCG TCATTCCGGG ACTCGGCGAT GTGCCGCTGA CGATGGCGCG CTGCTGCAAG
CCGCGGCCGC CCGAGGCGAT CGTCGCCTAC ACCACGGTCG GGCGCGGCGT CACCGTGCAC
CGGGCCGACT GCGCGTCGCT CAGGCGCGCC AACCAGGCCC GGCAGATGCC CGCCGAATGG
GCGCTCGATC TCGGCACCGG TTTCGAGGTC GACATCCGGC TCAAGGCCTT CGATCGTCAG
GGCTTGCTGC GCGACGTGTC GGACGTGATT GCGAAGGACA AGCTCGATGT GCTGCGCGTG
AACACCGAGA CCCGCGGCGA GTACGCGCAG ATGCAGCTCA CGGTCCGCAT CAAGGAGCTG
CAGCAGCTGT CCCGCCTGCT GGCCCGCCTG CAGCACGTGC AGAACGTCGT CGAGGTGAGG
CGCAGCTAG
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| Protein sequence | MNEIVRPRCY EATDRESARQ ALARVLPVAE NDLPWRALDY AYERLGGSEA FAHSVGSALI
AAELKVGADA VAAALLHACL GDEAEMDERF NSAAQLARGV AAMARIESLA ATTTDKRIDP
HAQLEALRQM VLAMVEDIRV VLLKLAERTH ALRCAASPAP EGDDPDERAA LREALGQQAR
ELFAPLANRL GVWQIKWEME DWAFRYLEPE TYRTIAAQLD EKRADREAYI LGIIERLKAE
LALHGIEAEV TGRPKHIASI VNKMRRKHLS FEQLYDIRAV RVLVRQEIDC YTVLGLVHNL
WQPIPGEFDD YISQPKSNDY RSLHTAVIGP EDRALEVQIR TFDMHRHAEL GVAAHWRYKE
SGKQDAQYEE KIAWLRRILE WKDDVADSSE FREQFKTELF HDQVYVLTPQ GRVVALDRGA
TPVDFAYAVH TDLGHRCRGA KVNGAMVPLN TVLDNSQRVE IVTAKEGTPS RDWLNPALGY
LATHRARSKV RAWFRQRDVG EQVNLGRSLL DKELKRLGVG DVNHEKLAQR LKFSSVDEFF
AALGRGDVGQ RDLVGALQEP GKAPPALAPT AKPRSRPGSG SPVVIPGLGD VPLTMARCCK
PRPPEAIVAY TTVGRGVTVH RADCASLRRA NQARQMPAEW ALDLGTGFEV DIRLKAFDRQ
GLLRDVSDVI AKDKLDVLRV NTETRGEYAQ MQLTVRIKEL QQLSRLLARL QHVQNVVEVR
RS
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