Gene Tbd_1756 details

Gene Information

• Locus tag: Tbd_1756
• Symbol: smpB
• ID: 3671341
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiobacillus denitrificans ATCC 25259
• Kingdom: Bacteria
• Replicon accession: NC_007404
• Strand: +
• Start bp: 1847053
• End bp: 1847502
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637710448
• Product: SsrA-binding protein
• Protein accession: YP_315514
• Protein GI: 74317774
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.941289
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.680146
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCATCG CCGACAACAA AAAAGCCTTC CACGATTACT TCATCGAGGA GCGTTTCGAG 
GCTGGCCTCG TGCTCGAAGG CTGGGAGGTG AAGGCGATCC GCGCCGGCCG CGTGCAGCTG 
AAGGAGGCCT ACGTCGTCGT CAAGAACGGC GCCGTCTACC TGATCGGCTG CCACATCAGC 
CCGTTGCCGA CCGCATCGAC GCATATCCAT CCCGACCCCA CGCGTTCGCG CAAGCTGCTG 
CTGCATGCCG CCGAAATCAA CAAGCTCATC GGTAAGACCG AACGCGCCGG CTTCACGCTC 
GTCCCGCTCG ACATGCACTA TTCGAAGGGG CGCATCAAGC TTGAAATCGG CCTCGCCAAG 
GGCAAGAAGC AGCACGACAA GCGCGCCGCC GAGAAAGACC GCGAATGGCA GCGCGAGAAG 
CAGCGGCTCG TCCGCTCGGC GCAGCATTGA 

 

Protein sequence

MSIADNKKAF HDYFIEERFE AGLVLEGWEV KAIRAGRVQL KEAYVVVKNG AVYLIGCHIS 
PLPTASTHIH PDPTRSRKLL LHAAEINKLI GKTERAGFTL VPLDMHYSKG RIKLEIGLAK 
GKKQHDKRAA EKDREWQREK QRLVRSAQH