Gene Tbd_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1705 
Symbol 
ID3671288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1795496 
End bp1795834 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content61% 
IMG OID637710395 
ProductHIT family protein 
Protein accessionYP_315463 
Protein GI74317723 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT GCATCTTCTG CAAGATCGTC CGAGGCGAAC TGCCCGCCAG CAAGGTCTAT 
GAAGACGAGG AATTACTCGC CTTCCACGAC ATCCATCCGT TTGCGCGCGT GCATCTGCTG
ATCATTCCCA AGCTGCATGT CGCGTCGCTG GCCGACTGCA CGGTCGCGCA CCAGGACCTG
CTCGGCAAGA TGCTGCTGCT GGCCCCGCGT TTGGCGAAGG AATCGGGGCT CGACGCCGGT
TTCAAGACCC TCATCAATAC CGGCCGCGGA GGCGGCCAGG AAGTATTCCA CATTCACGTA
CACGTGTTCG GCGGCGGCGA TCCCGCCAAG CGCGCTTGA
 
Protein sequence
MSDCIFCKIV RGELPASKVY EDEELLAFHD IHPFARVHLL IIPKLHVASL ADCTVAHQDL 
LGKMLLLAPR LAKESGLDAG FKTLINTGRG GGQEVFHIHV HVFGGGDPAK RA