| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1697 |
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| Symbol | |
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| ID | 3671280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1788416 |
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| End bp | 1789261 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637710387 |
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| Product | farnesyl-diphosphate farnesyltransferase |
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| Protein accession | YP_315455 |
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| Protein GI | 74317715 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.242152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGC ATCGCTACTG CCAGGAGCGC GCCGCCGCAA GCGGCTCCAG CTTCTACTAC
AGTTTCGTCT TCCTGCCGAC CGAAGTGCGC CGCGCGATTA CTGCGTTCTA CGCACTGTGC
CGCGAGCTCG ACGACGTCGT CGACGAATGC CACGAGCGCC AGTTGGCCGA ACTCAAGCTC
GCCTGGTGGC GGGAGGAAAT CGGCCGCTTT GCCGCAGGCG CGGCGACCCA CCCCGCGACC
CGCGCACTCG CCGACACCGC GCGGGGAGCG AGCGTCCAAC CCGCGCTACT GCTGGAAATC
GTCGACGGCA TGGCGATGGA TCTCGAGCAC GCCCGCTACG CCGACTTCCG CGCGCTCAAA
CTCTATTGCC ATCGGGCGGC CAGCGTCGTC GGCGAAATCG CCGCCGGCAT CTTCGAGGGC
GCGCGCGGCG AGCACGACCG CGAAGTCCGC CGCTACGCGC ACGAACTCGG ACTCGCCTTC
CAGCTGACGA ACATCATCCG CGACGTCGGG GAAGACGCGC GACGCGGCCG CATCTATCTC
CCGCTCGACG AAATGGCGCG CTTCGGCGTC GCCGAGGCCG ACGTGCTTGA AGGCCGCGAC
ACCCCCGCGT TTCGGGCCCT GATGCAGTTT CAATACGAGC GGGCGGTCGC GCATTACGAG
CGCGCACTCG CCACGCTGCC GAGCGCCGCG CGGCGGGCCC AACGTCCCGG CCTCGTGATG
GCCGCGATCT ACCGCAGCCT GCTGGATGAA ATCCGCCGCG ACGGCTTTCC GGTTTTGCGC
GCGCGCATCG CACTGACGCC CTTGCGCAAG CTTTGGCTCG CCAGCCGCAC CTGGCTCTTT
CCATGA
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| Protein sequence | MDAHRYCQER AAASGSSFYY SFVFLPTEVR RAITAFYALC RELDDVVDEC HERQLAELKL
AWWREEIGRF AAGAATHPAT RALADTARGA SVQPALLLEI VDGMAMDLEH ARYADFRALK
LYCHRAASVV GEIAAGIFEG ARGEHDREVR RYAHELGLAF QLTNIIRDVG EDARRGRIYL
PLDEMARFGV AEADVLEGRD TPAFRALMQF QYERAVAHYE RALATLPSAA RRAQRPGLVM
AAIYRSLLDE IRRDGFPVLR ARIALTPLRK LWLASRTWLF P
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