| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1692 |
|---|
| Symbol | |
|---|
| ID | 3671274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1781871 |
|---|
| End bp | 1782839 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637710381 |
|---|
| Product | putative ATPase |
|---|
| Protein accession | YP_315450 |
|---|
| Protein GI | 74317710 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.593174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGTT CCGACCAACT CAAGGCTTTG TTGCGCGCGC ATATCGATGG CGACGAAGAA
CGGTTCAGCA CCGTCGCCAT GCAACTGGCC GCCCATGAAG CGCGCATTGG CCACGGAAAG
CTGGCGCTCG AACTGCGGGA CCTCATCGAC AAGGCCAAAA CGCGCCAAAC TCGGCAACCC
ATCCCTCTGG TTCAGCCGCG CGGAGAGATG GCCGACTTGC TGCAAGCCAG CTACCCGAAG
GCCCGCCTCG CTGACATGGT TTTGGACAAC AGCATCCAAT CCCGCCTGGA TCGGCTCATC
CGAGAACAAC GCCAAGTTGA AAAGCTGCGT TCCCACGGCC TCTCCCCGCG GAAAAAACTC
CTGTTGGTCG GCCCGCCGGG CACCGGCAAA ACGCTTACGG CCTCCGTTCT CGCCGGAGAA
CTCAACCTGC CGCTGTTTGT GGTGCGTTTG GACAGCCTCA TGACCAAGTT CATGGGCGAG
ACCGCCGCCA AGCTGCGTCT CATCTTCGAC GCCATCCGTC GCACCCGTGC GGTCTACCTG
TTCGACGAAT TCGATTCCAT TGGCGGGCAG CGCGGTTTGG GTAACGACGT GGGTGAAATC
CGTCGAGTGC TCAATAGCTT TTTGCAACTG ATCGAGCAGG ACATGTCCGA CAGCCTTCTC
ATCGCTGCCA CCAACCACCC GGACCTACTG GACCATGCCC TGTTCCGCCG TTTCGACGAC
GTGATCCGCT ACACCGTCCC AGATGAGCAA CTCATTGTTG AGACCCTCAA AACCAAGCTG
GCTGGCTACA AAGCCCGCCG ACTCGCCTGG AAGACCCTGG CCAAAGCCGC CTCTGGCCTA
AGTCATGGCG ACCTCACCCG CGCCTGCGAA GACGCCATCA AAGACGCCAT CCTCCATGAC
CGCCCGATGT TGGAAACGGC GGACATCCGC GCCACCCTGG AAGAAAGAAA AGCAACCCAC
GACCGATAA
|
|---|
| Protein sequence | MPSSDQLKAL LRAHIDGDEE RFSTVAMQLA AHEARIGHGK LALELRDLID KAKTRQTRQP
IPLVQPRGEM ADLLQASYPK ARLADMVLDN SIQSRLDRLI REQRQVEKLR SHGLSPRKKL
LLVGPPGTGK TLTASVLAGE LNLPLFVVRL DSLMTKFMGE TAAKLRLIFD AIRRTRAVYL
FDEFDSIGGQ RGLGNDVGEI RRVLNSFLQL IEQDMSDSLL IAATNHPDLL DHALFRRFDD
VIRYTVPDEQ LIVETLKTKL AGYKARRLAW KTLAKAASGL SHGDLTRACE DAIKDAILHD
RPMLETADIR ATLEERKATH DR
|
|---|
| |