Gene Tbd_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1688 
Symbol 
ID3671270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1778665 
End bp1779834 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content62% 
IMG OID637710377 
Producthypothetical protein 
Protein accessionYP_315446 
Protein GI74317706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.845062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.821024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAAA ACAAACTGTT TCGCAGTCTG GCTGTGGCCG GCCTGCTGTC GTGTTCAATG 
GCTGCAAACG CGGCCTACCC AGTGATCGAC GCCTCTGTAC TCAATGCCGT GAATACGGCG
CGGACCGATA TTGTCCGGAT GCTGAAGTCG ATCAACGACA CGATCCAGAA GACCGCGAAA
AACATTCAGG ACAACGCAAT CCAGGTCGAG CGCGATTCCA ACGCCCTCAA AGCCGAGCAA
CAGCGCGGCG AACGATCGCT TCCCGAAAAC CGTTGCGCCA CGGGCGGCGT GGCCGAGGCA
GTTGGAGCCG CGGGAAGTTC TGTAGTCAGA AACACCCGCG CCTATGGCGG TGCCGGCGCC
TACGGCGGCC GCAACGCTAG GAATCCACTC GGTGGCGACA GGGGCCTTGA ATCCAGGGTG
AACGAAGCCC CGCACTCGCA GGCCGCGGCC GCGGCAACGG TGCTCGAAAC GCACGCCAGC
TACTGCAATT CGCGCGATGC AAGCGAGTAC CCGAACCTAT GCAGAGGCGC AGCCGCACTG
CCCGACGCCG ACGTCCAGGC CGCCAGTCTG TTTTATGGGG CCGGCAGCAA GAGGGACGAG
CGCAGCTACA CGTTCAACGC CAGGCAGATC GACGCGGCGA TGGCGTACCT GAAGAACGCG
AACGACAGCA TTCCTCCTAA TCGCCTGACC GCGGCCGACG CCCGGAAGCC TTCCGGCCGT
GCCTACCTGG CACTGCAAGC CGGCCTGGCG GCCAGCACCT CAATGGCGTA TTTCCCGAGC
GAGCTGGCTC TCGCCGAGCG TACTCCGCTG AGGGGCACCC AGGACGTGCT GCGCCTGCTG
GAAAAGTCGA GTGCCTACCC GTCTGGCGGT CGCGGATTCG TTGATGCAAA CGATTTCCCT
GACGGTGTGT CGCGGATGGA CCTGTTGCGC CTGGACGTGG CGCGCCGCTA TGAAAACCCG
AAATGGTATG TGGACGTGTC GGGCAATCCG GATTCGATCC AGAAGGAAGA GATCTTCATG
CGGGCCTTGG CGCTCAACAT GCAGTTCCGC CAGATCGAGC AGATGGAGCG GATCGAAGTG
CTGCTGGGCC AGCTCGTCGC CCGTGACGTG AACCGCGACC TCAAGCCGCG TCTGCAAGCG
CAGTACCAAT CTATCAAGGT GACCAAATGA
 
Protein sequence
MSKNKLFRSL AVAGLLSCSM AANAAYPVID ASVLNAVNTA RTDIVRMLKS INDTIQKTAK 
NIQDNAIQVE RDSNALKAEQ QRGERSLPEN RCATGGVAEA VGAAGSSVVR NTRAYGGAGA
YGGRNARNPL GGDRGLESRV NEAPHSQAAA AATVLETHAS YCNSRDASEY PNLCRGAAAL
PDADVQAASL FYGAGSKRDE RSYTFNARQI DAAMAYLKNA NDSIPPNRLT AADARKPSGR
AYLALQAGLA ASTSMAYFPS ELALAERTPL RGTQDVLRLL EKSSAYPSGG RGFVDANDFP
DGVSRMDLLR LDVARRYENP KWYVDVSGNP DSIQKEEIFM RALALNMQFR QIEQMERIEV
LLGQLVARDV NRDLKPRLQA QYQSIKVTK