Gene Tbd_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1682 
Symbol 
ID3673069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1770049 
End bp1770510 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content65% 
IMG OID637710371 
Productnuclease (SNase-like) 
Protein accessionYP_315440 
Protein GI74317700 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0199869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0644244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCG CACTTGTCGC CGTCCTGCTG GCCGCTAGCT CGGCCGCACT CGCGGATTTC 
TCCGGCACCG TCGTTCGCAT CGTCGACGGC GATACGCTGG ACGTCCTTGT ACAAAACCGC
CCTGTACGCG TCCGCCTGGC TCAGATCGAT GCGCCGGAGC GCCGGCAGGC GTACGGGACA
CGCGCCCGGC AAGCCTTGTC CGCCATGGTG TTTCGACGGG TGGTCACCGT GTCCGATGCC
GGGGCAGATC ATTACGGCCG CCGGCTAGGC ACCGTCTTCG TCGCCGGCAT GAACATCAAC
GCTGCGATGG TTGATCGCGG CATGGCGTGG GCTTATCGCC AGTACCTCAG GGACCGTTCA
CTGATCGGGT TGGAACAGCA AGCCCGCGCT GAACGTCGCG GCCTCTGGAA CGATCCTGCG
CCGGTGACAC CTTGGTTTTT CCGCGCTCAC CCTTTCCCCT GA
 
Protein sequence
MRAALVAVLL AASSAALADF SGTVVRIVDG DTLDVLVQNR PVRVRLAQID APERRQAYGT 
RARQALSAMV FRRVVTVSDA GADHYGRRLG TVFVAGMNIN AAMVDRGMAW AYRQYLRDRS
LIGLEQQARA ERRGLWNDPA PVTPWFFRAH PFP