Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1677 |
Symbol | |
ID | 3673064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1765288 |
End bp | 1765926 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637710366 |
Product | ATP-dependent Clp protease proteolytic subunit ClpP |
Protein accession | YP_315435 |
Protein GI | 74317695 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.209719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.102806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATATG ATTTCGAACG GACCGCCCCC GAACCGCAGG GGCTCGGCCT GGTGCCGATG GTGGTCGAGC AGAGCGGTCG GGGCGAGCGC GCCTACGACA TTTACTCCCG CCTCCTCAAG GAACGGGTCA TTTTCCTCGT CGGGCCAGTG AACGACGCGA CGGCCAACCT GATCGTCGCG CAGATGCTTT TCCTCGAATC GGAAAACCCG GACAAGGACA TCTATCTGTA CATCAACTCG CCGGGCGGAT CGGTGTCCGC CGGCCTCGCG ATCTACGACA CGATGCAGTT CATCAAGCCT GACGTGTCGA CGCTCTGCAT CGGCCAAGCT GCGAGCATGG GCGCGTTCCT GCTGACCGCA GGCGCCAAGG GCAAGCGTTA CTGCCTACCC AACTCGCGCG TCATGATCCA CCAGCCTCTC GGCGGATTCC AGGGCCAGGC GTCGGACATC GAGATCCATG CCAAGGAAAT TCTCTATTTG AAAGCACGAC TGAACGGCAT GCTCGCGAAG CATACCGGCC AGAGTCTCGA AGTGATCGAT CGGGACACCG ATCGCGACAA CTTCATGAGT GCCGAGGACT CGGTGAAGTA CGGGCTGGTC GACAAGGTCC TGACCAGCCG CAACGAAGCA GGCAACTAG
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Protein sequence | MLYDFERTAP EPQGLGLVPM VVEQSGRGER AYDIYSRLLK ERVIFLVGPV NDATANLIVA QMLFLESENP DKDIYLYINS PGGSVSAGLA IYDTMQFIKP DVSTLCIGQA ASMGAFLLTA GAKGKRYCLP NSRVMIHQPL GGFQGQASDI EIHAKEILYL KARLNGMLAK HTGQSLEVID RDTDRDNFMS AEDSVKYGLV DKVLTSRNEA GN
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