| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1676 |
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| Symbol | clpX |
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| ID | 3673063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1764004 |
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| End bp | 1765275 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637710365 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_315434 |
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| Protein GI | 74317694 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.470065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0628654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA AAGGCTCGGG AGACAAGCTC CTTTACTGTT CCTTCTGCGG CAAAAGCCAG
CACGAGGTGC GCAAGCTCAT CGCGGGACCG TCGGTGTTCA TCTGCGACGA ATGCGTCGAA
CTGTGCAACG ACATCATCCG TGAGGAGATC CAGCAGGCCG ATAGCCAGAA GGGCGCAAGT
TCCGATCTGC CGACGCCGCA CGAGATCAGC GGCATTCTCG ACCAATACGT GATCGGGCAG
GGCCAGGCGA AGAAGGCCCT GGCGGTCGCG GTCTACAACC ACTACAAGCG CCTGCGCAGC
AGCTCGGGAA GCGGCGACGT CGAACTGGCA AAGAGCAACA TCCTGCTGAT CGGGCCGACC
GGCTCGGGCA AGACCCTGCT CGCGCAGACG CTCGCACGCC TGCTCAACGT TCCCTTCGTG
ATCGCCGACG CGACGACGCT GACCGAAGCG GGTTATGTCG GTGAAGACGT CGAGAACATC
ATCCAGAAGC TGCTGCAGAA GTGCGATTAC GACGTCGACA AGGCGAAGCA GGGCATCGTT
TACATCGACG AAATCGACAA AATCTCGCGC AAGGCCGACA ACCCCTCGAT CACCCGCGAT
GTATCGGGCG AGGGCGTGCA GCAGGCCCTG CTCAAGCTGA TCGAAGGCAC GACCGCGTCG
GTGCCGCCGC AGGGCGGGCG CAAGCATCCG AACCAGGAAT TCGTCCAGGT CGACACCAGC
AACATCCTGT TCATTTGCGG CGGCGCGTTC AGCGGGCTCG AGAAGGTGAT TCGCGGGCGT
ACCGAGAAGG GCGGGATCGG TTTTGGCGCA CAGGTCAAGA ACGTCGACGA GAACAAGCGC
GACGCCGAAC TGCTGCATCA GGTCGAGCCG GAGGATCTCA TCAAGTACGG GTTGATCCCC
GAATTCGTCG GCCGTCTGCC GGTGGTTGCG ACGCTCGACG AACTTGACGA GGCGGCGCTC
GTGCAGATCC TGACCGAGCC GAAGAACGCC CTGACCAAGC AGTTCGCGAA ACTTTTCAAG
ATGGAAGGCG TCGATCTTGA ATTCCGCGAC GATGCGCTCA ACGCGATCGC CAAGCGCGCG
CTGCTGCGCC GCACCGGCGC GCGCGGCCTG CGCTCAATCA TCGAGCACGC GCTGCTCGAC
ACCATGTACG ACCTGCCTTC GCTCAAGGGC GTGAGCAAGG TCGTCGTCGA CAATGCCCTC
ATCAGCGGCG AAGGCCAGCC TTTGCTGATC TACTCGGAGC AGGGTGACCA ACCGCTCGCG
GCCGGAGCCT GA
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| Protein sequence | MADKGSGDKL LYCSFCGKSQ HEVRKLIAGP SVFICDECVE LCNDIIREEI QQADSQKGAS
SDLPTPHEIS GILDQYVIGQ GQAKKALAVA VYNHYKRLRS SSGSGDVELA KSNILLIGPT
GSGKTLLAQT LARLLNVPFV IADATTLTEA GYVGEDVENI IQKLLQKCDY DVDKAKQGIV
YIDEIDKISR KADNPSITRD VSGEGVQQAL LKLIEGTTAS VPPQGGRKHP NQEFVQVDTS
NILFICGGAF SGLEKVIRGR TEKGGIGFGA QVKNVDENKR DAELLHQVEP EDLIKYGLIP
EFVGRLPVVA TLDELDEAAL VQILTEPKNA LTKQFAKLFK MEGVDLEFRD DALNAIAKRA
LLRRTGARGL RSIIEHALLD TMYDLPSLKG VSKVVVDNAL ISGEGQPLLI YSEQGDQPLA
AGA
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