| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1671 |
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| Symbol | |
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| ID | 3673056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1755715 |
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| End bp | 1757856 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637710358 |
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| Product | oligopeptide ABC transporter periplasmic component |
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| Protein accession | YP_315429 |
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| Protein GI | 74317689 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.218996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.142506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGTA CAGGCTCGGT ACTGCTCGGA CTCGCTTTGC TCGCCGGATG CGGCGACACG
TGGAACAACC CATACCCGGA CAGTCAAGCC GCCGCCCCGG TTCTTTATAG CGCGTTTTCG
GAACGTCCGA AGCATCTCGA TCCAGCGCGT TCGTATAGCG CAAACGAGGT CGAATTCACC
GGACAGATCT ACGAGCCGCC GCTGCAATAC CATTTCCTCA AACGTCCTTA CACCCTCGTC
CCGCTGACGG CGGCGCGCGT GCCTGAGCCG CGCTACTACG ATGCGTCCGG CAAGCGGTTG
CCCGACGACG CAGCGTCGTC GCGCATCGCC GAGAGCGTGT ACGAAATCCG CGTCCGTCCC
GGCATACGCT ATCAACCGCA CCCGGCCTTC GCGCGTGACG AAGCCGGGCG CTATCGCTAT
CACGCGCTCG AGTCGGCAGC GCTCGACGGC AAGAGCCGCA TCAGCGACTT CGCCCACCAA
GGCACGCGCG AGCTCGTCGC CGCCGACTAC GTCTACCAGA TCAAGCGGCT TGCCCATCCC
GGCCTCAGTT CGCCGATTTT CGGCCTGATG AGCGAACACA TCGTCGGACT CAAGGCGCTT
GGCGCGGCAC TCGAGAAGGC GGCGCAGGCG CAACCCGGAC GCCGGCTGGA TCTCGATCGC
TTTCCGCTTG CCGGCGCGCA GGTGGTCGAT CGCTACACGT ATCGCATCCG CATCCGCGGC
AAGTATCCGC AGTTCATCTA CTGGCTCGCG ATGCCGTTTT TCGCGCCGGT GCCGTGGGAG
GCCGAAACTT TCTACGCCCA GCCGGGCATG GCCGACAGGA ACCTCACGCT CGACTGGCAG
CCGGTCGGAA CCGGGCCCTA CTATCTTGCC GAGAACGATC CCAACAGGCG GATGGTGTTG
AAGCGCAACC CGTATTTCCA CGGCGAGGTC TATCCGGGCG AAGGCAGCGT GGAGGATCGC
GCGGCCGGGC TGCTCGCCGA TGCGGGCAAG CGCCTGCCGC TCGTCGACGA GGCCGTTTAC
AGTCTGGAAA AGGAGACGAT CCCGTACTGG AGCAAGTTTC TCCAGGGCTA TTACGACAGC
TCGGGTATCA GTTCCGACAG CTTCGACCAG GCGGTCCGTT TTTCGGCCAA GGGCGAACCC
GAGTTGACCG CCAGCATGCG CGCGCAGGAT ATCCATCTCA TTACCGCGGT CGCCGCGTCG
ATCTGGTACG TCGGCTTCAA CATGCTCGAT CCGGTCGTCG GCGGGCTCGG CGAGGATCGT
CGCAAGCTGC GCCAGGCGCT TTCAATCGCT TTCGACTACG ACGAATTCAT TTCCATTTTC
CTCAACGGCC GCGGCATCCC CGCGCAAGGC CCGCTGCCCC CGGGCCTGTT CGGCTATGTC
GAGGGCCCGG CCGGCCTCAA CCCCTACGTC TACGAGGCGC GCGGCGAAAA AATCGAGCGC
CGGCCGATCG AGACCGCGAA GAAGCTGTTG GCCGAGGCGG GCTATCCGAA CGGACGTCAC
GCCAAGACCG GCCAGCCGCT CGTGCTCTAT TTCGACACGA TGGCCGCGGG GCCCGACGCC
AAGTCGCGGC TCGACTGGAT GAAGAAGCAG CTCGACAAGC TCAACGTGCA ACTCGTGGTA
CGCGGAACCG ATTACAACCG CTTCCAGGAC AAGATCCGCA AGGGCAACGC CCAGCTCTTC
GAATGGGGCT GGAACGCGGA TTATCCCGAC CCCGAGAACT TCTTCTTTCT GCTCTACGGG
CCGCACAAGA AGGTCAGCAG CGGCGGCGAG AACGCGGCCA ATTACGACAA CCCGGAATTC
GACCGGCTGT TCGAGCGCAT GAAGGACATG GACAACGGCC CCGAGCGTCA GGCCGTGATC
GACGCGATGC TCGAGATCGT GCGTCGCGAC GCGCCGTGGA TCTTCGCGTA CTACCCGAAG
TCCTTCGGCC TGCGCCACGG CTGGGTCCAC AACGTCAAGC CCAATCTGAT GGCGAACAAC
ACCCTGAAGT ACCGGCGCAT CGATCCTGCG CTGCGCGAGG AACGGCGCGC GGCCTGGAAC
CGGCCGGTGC TGTGGCCTGT CGCCTTGCTC GTGGTCGGGC TCGTCGTGCT GATCGCGCCC
GCGGCGAGCG CGTGGCGGCG GCATGAGCGG AAGGTCGCCT GA
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| Protein sequence | MTRTGSVLLG LALLAGCGDT WNNPYPDSQA AAPVLYSAFS ERPKHLDPAR SYSANEVEFT
GQIYEPPLQY HFLKRPYTLV PLTAARVPEP RYYDASGKRL PDDAASSRIA ESVYEIRVRP
GIRYQPHPAF ARDEAGRYRY HALESAALDG KSRISDFAHQ GTRELVAADY VYQIKRLAHP
GLSSPIFGLM SEHIVGLKAL GAALEKAAQA QPGRRLDLDR FPLAGAQVVD RYTYRIRIRG
KYPQFIYWLA MPFFAPVPWE AETFYAQPGM ADRNLTLDWQ PVGTGPYYLA ENDPNRRMVL
KRNPYFHGEV YPGEGSVEDR AAGLLADAGK RLPLVDEAVY SLEKETIPYW SKFLQGYYDS
SGISSDSFDQ AVRFSAKGEP ELTASMRAQD IHLITAVAAS IWYVGFNMLD PVVGGLGEDR
RKLRQALSIA FDYDEFISIF LNGRGIPAQG PLPPGLFGYV EGPAGLNPYV YEARGEKIER
RPIETAKKLL AEAGYPNGRH AKTGQPLVLY FDTMAAGPDA KSRLDWMKKQ LDKLNVQLVV
RGTDYNRFQD KIRKGNAQLF EWGWNADYPD PENFFFLLYG PHKKVSSGGE NAANYDNPEF
DRLFERMKDM DNGPERQAVI DAMLEIVRRD APWIFAYYPK SFGLRHGWVH NVKPNLMANN
TLKYRRIDPA LREERRAAWN RPVLWPVALL VVGLVVLIAP AASAWRRHER KVA
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