Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1666 |
Symbol | |
ID | 3673051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1749531 |
End bp | 1751036 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637710353 |
Product | peptidoglycan-binding protein LysM |
Protein accession | YP_315424 |
Protein GI | 74317684 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGGAA TCAAATTCAC CCGTATCGGT GCAGCGCGCC TCCCTCTCGG CCGGCTCGGA TTGGCGGCCC TGATGTTCTG GGCAAGCCAT CACAGCCTGG CGACGGAACC CCGACAAGGC ATCCACACAC TCGAATGGAA CGGCGGCAGT GATAACGTGC CCGCTGCCGA CGAGGTGCCC GCGATCGCCC TTGAAGCTGG CACGCGCGAC GTCTGGCAGC GTGTCCGCGA CGGTTTCCGC ATCGACGACC AGGCGGCGCC GAACCCGCTC ATCGCTGTTC ACGAATCCTG GTACGCAGCC CGGCCCGAAC ACGTGCGTCG CGTCGTCGAG CGCGCGCGCC GCTATCTTTT CTATATCGTC GAAGAGGTCG AGCGGCGCGG CATGCCGATG GAAATCGCGC TGCTGCCCAT GATCGAGAGC GCGTTCGACC CCGGCGCGCT CTCGCCCTCC GCGGCGTCCG GAATCTGGCA GTTCATTCCT TCCACCGGAC GTCTGTACGG CCTCAGGCAG GACAAATGGT ACGACGGCCG CCTCGATTTC ACCGCCGCGA CCGGGGCCGC ACTGGACTAC CTCGGCAAGC TCTATCTCGA CTTCGGTGAC TGGCAACTCG CGCTCGCGGC GTACAACTGC GGCGAAGGCT GCGTCGGTCG CGCGATCCAG CGGAACGTCC AGCAAGGCCT TCCAACCGAC TACGCAAGCC TCGCGCTGCC GAACGAGACG CGTCACTACG TCCCCAAGCT GCTCGCGATC CGCAACCTGG TGCGCAATCC CGAGCAATAC GGCATGACGA TAGACGGGCT TCCAAACGAG CCTTATTTCA ACCTGGTGAG CGTGAGCGCC AGCATGGATC TGCATTCGGC CGCGCGGCTG GCGGGCATGA CCATCGAGGA GTTCGTCGCG CTCAACGCGG CCTTTCCGCG CAAGCTGATC CGCTCCGACA CGCCGGTCAG CCTGCTCGTT CCGGTCGACC GCGCCGACCG TTTCCAGCGC AATCTGGATG CCGGCGACTG GGACAGTTGG CAACCCTACG CCGCACGCAA GGGCGAGCGG CCCGAGGAGA TCGCGCGCCG CTTCAAGGTC AGCGTGGCAC GACTCGCCGA ACACAACCAG TTCAAGCTCA GACGCGGCAG GCTGGCACGC GCACAGACCG TGCTGGTGCC GGTCAAACGT CGTGACACCG GTATCGCCGC GAACCAGTCG GGCAGTCGTC GTCCTGCGCC GACCGAACAC GAAGTCAAGG CTGGCGAGAC GCTCTACGGC GTCGCGCGGC GCTACGGCTT GAGCGCCCGC GAATTGGCGG ACGCCAATCC GGGGGTCGGG GCAAGACTCA GGCCGGGGCA GGTCCTGCAA CTGGCAATCC CGGTTTCTTC GCCGCGCGAG ACGGCCCCAT TGCGACCGCG CAAGACGGGC GCTCGGGGTG CCGCCCTGCC GTCACACTAC GCCCCGAACC GCGGCGACAC GCTTCTCACG ATCGCCCGCC GCTTCGATAT CAGCATGGTC AGGTGA
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Protein sequence | MPGIKFTRIG AARLPLGRLG LAALMFWASH HSLATEPRQG IHTLEWNGGS DNVPAADEVP AIALEAGTRD VWQRVRDGFR IDDQAAPNPL IAVHESWYAA RPEHVRRVVE RARRYLFYIV EEVERRGMPM EIALLPMIES AFDPGALSPS AASGIWQFIP STGRLYGLRQ DKWYDGRLDF TAATGAALDY LGKLYLDFGD WQLALAAYNC GEGCVGRAIQ RNVQQGLPTD YASLALPNET RHYVPKLLAI RNLVRNPEQY GMTIDGLPNE PYFNLVSVSA SMDLHSAARL AGMTIEEFVA LNAAFPRKLI RSDTPVSLLV PVDRADRFQR NLDAGDWDSW QPYAARKGER PEEIARRFKV SVARLAEHNQ FKLRRGRLAR AQTVLVPVKR RDTGIAANQS GSRRPAPTEH EVKAGETLYG VARRYGLSAR ELADANPGVG ARLRPGQVLQ LAIPVSSPRE TAPLRPRKTG ARGAALPSHY APNRGDTLLT IARRFDISMV R
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