| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1666 |
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| Symbol | |
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| ID | 3673051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1749531 |
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| End bp | 1751036 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637710353 |
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| Product | peptidoglycan-binding protein LysM |
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| Protein accession | YP_315424 |
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| Protein GI | 74317684 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGGAA TCAAATTCAC CCGTATCGGT GCAGCGCGCC TCCCTCTCGG CCGGCTCGGA
TTGGCGGCCC TGATGTTCTG GGCAAGCCAT CACAGCCTGG CGACGGAACC CCGACAAGGC
ATCCACACAC TCGAATGGAA CGGCGGCAGT GATAACGTGC CCGCTGCCGA CGAGGTGCCC
GCGATCGCCC TTGAAGCTGG CACGCGCGAC GTCTGGCAGC GTGTCCGCGA CGGTTTCCGC
ATCGACGACC AGGCGGCGCC GAACCCGCTC ATCGCTGTTC ACGAATCCTG GTACGCAGCC
CGGCCCGAAC ACGTGCGTCG CGTCGTCGAG CGCGCGCGCC GCTATCTTTT CTATATCGTC
GAAGAGGTCG AGCGGCGCGG CATGCCGATG GAAATCGCGC TGCTGCCCAT GATCGAGAGC
GCGTTCGACC CCGGCGCGCT CTCGCCCTCC GCGGCGTCCG GAATCTGGCA GTTCATTCCT
TCCACCGGAC GTCTGTACGG CCTCAGGCAG GACAAATGGT ACGACGGCCG CCTCGATTTC
ACCGCCGCGA CCGGGGCCGC ACTGGACTAC CTCGGCAAGC TCTATCTCGA CTTCGGTGAC
TGGCAACTCG CGCTCGCGGC GTACAACTGC GGCGAAGGCT GCGTCGGTCG CGCGATCCAG
CGGAACGTCC AGCAAGGCCT TCCAACCGAC TACGCAAGCC TCGCGCTGCC GAACGAGACG
CGTCACTACG TCCCCAAGCT GCTCGCGATC CGCAACCTGG TGCGCAATCC CGAGCAATAC
GGCATGACGA TAGACGGGCT TCCAAACGAG CCTTATTTCA ACCTGGTGAG CGTGAGCGCC
AGCATGGATC TGCATTCGGC CGCGCGGCTG GCGGGCATGA CCATCGAGGA GTTCGTCGCG
CTCAACGCGG CCTTTCCGCG CAAGCTGATC CGCTCCGACA CGCCGGTCAG CCTGCTCGTT
CCGGTCGACC GCGCCGACCG TTTCCAGCGC AATCTGGATG CCGGCGACTG GGACAGTTGG
CAACCCTACG CCGCACGCAA GGGCGAGCGG CCCGAGGAGA TCGCGCGCCG CTTCAAGGTC
AGCGTGGCAC GACTCGCCGA ACACAACCAG TTCAAGCTCA GACGCGGCAG GCTGGCACGC
GCACAGACCG TGCTGGTGCC GGTCAAACGT CGTGACACCG GTATCGCCGC GAACCAGTCG
GGCAGTCGTC GTCCTGCGCC GACCGAACAC GAAGTCAAGG CTGGCGAGAC GCTCTACGGC
GTCGCGCGGC GCTACGGCTT GAGCGCCCGC GAATTGGCGG ACGCCAATCC GGGGGTCGGG
GCAAGACTCA GGCCGGGGCA GGTCCTGCAA CTGGCAATCC CGGTTTCTTC GCCGCGCGAG
ACGGCCCCAT TGCGACCGCG CAAGACGGGC GCTCGGGGTG CCGCCCTGCC GTCACACTAC
GCCCCGAACC GCGGCGACAC GCTTCTCACG ATCGCCCGCC GCTTCGATAT CAGCATGGTC
AGGTGA
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| Protein sequence | MPGIKFTRIG AARLPLGRLG LAALMFWASH HSLATEPRQG IHTLEWNGGS DNVPAADEVP
AIALEAGTRD VWQRVRDGFR IDDQAAPNPL IAVHESWYAA RPEHVRRVVE RARRYLFYIV
EEVERRGMPM EIALLPMIES AFDPGALSPS AASGIWQFIP STGRLYGLRQ DKWYDGRLDF
TAATGAALDY LGKLYLDFGD WQLALAAYNC GEGCVGRAIQ RNVQQGLPTD YASLALPNET
RHYVPKLLAI RNLVRNPEQY GMTIDGLPNE PYFNLVSVSA SMDLHSAARL AGMTIEEFVA
LNAAFPRKLI RSDTPVSLLV PVDRADRFQR NLDAGDWDSW QPYAARKGER PEEIARRFKV
SVARLAEHNQ FKLRRGRLAR AQTVLVPVKR RDTGIAANQS GSRRPAPTEH EVKAGETLYG
VARRYGLSAR ELADANPGVG ARLRPGQVLQ LAIPVSSPRE TAPLRPRKTG ARGAALPSHY
APNRGDTLLT IARRFDISMV R
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