Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1662 |
Symbol | |
ID | 3673047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1746795 |
End bp | 1747493 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637710349 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_315420 |
Protein GI | 74317680 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.862026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCAAA TCATCCTCGA TACGGAAACG ACCGGGCTCG ACCCGGCCCA GGGCCATCGC ATCATCGAAG TCGCGGCGGT GGAAATGGTC AACCGCCGGC TGACCGGCAA TCACCTCCAT CGCTACGTCA ATCCGGACCG TGACATCGAC GCCGGAGCCA TGCAGGTGCA CGGCATCACG CCGGAGTTTC TGCAGGACAA GCCGCGTTTC GGCGATATCG CGCGCGAGTT CGTCGATTTC ATCGACGGCG CCGAGCTGAT CATCCACAAC GCACCGTTCG ACGTTGGCTT TCTCAACATG GAGTTGCGCC TGCTCGGCAT GCCGCTCCTG GCGACCTGCT GCGGCGGGGT GACCGACACG CTGGCGATGG CCAAGGCGCT GCACCCCGGC CAGCGCAATA ACCTCGACGC ACTTTGCAAA CGCTACGCCG TCGACAATAC CGCGCGCACG CTGCACGGCG CGCTGCTCGA CTGCGAGTTG CTGGCCGCGG TCTATCTGGC GCTGACCCGC GGCCAGGAAA GCCTTTCGAT CGGACTGGAA ATACCGCGTT CGGAGAGCGG CCGTGCGGCG GACCGGCCGC GGCCGGCAGC GATTTTGTTG CCGGCGGACG CGGAGGAGGA GGCAGCGCAT GCGGCGCTGC TCGCGGCGAT CGCGAAGGAG AGCAAGGGCG AATGCCTGTG GGGCGTAGAG GCGCCTTGA
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Protein sequence | MRQIILDTET TGLDPAQGHR IIEVAAVEMV NRRLTGNHLH RYVNPDRDID AGAMQVHGIT PEFLQDKPRF GDIAREFVDF IDGAELIIHN APFDVGFLNM ELRLLGMPLL ATCCGGVTDT LAMAKALHPG QRNNLDALCK RYAVDNTART LHGALLDCEL LAAVYLALTR GQESLSIGLE IPRSESGRAA DRPRPAAILL PADAEEEAAH AALLAAIAKE SKGECLWGVE AP
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