Gene Tbd_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1642 
Symbol 
ID3673027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1726739 
End bp1727173 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID637710329 
Productputative periplasmic protein 
Protein accessionYP_315400 
Protein GI74317660 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0830703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGAA CCCGTATCGC AACGATCGCC TTTGCCGCCA GCCTCGCGCT CTTTGCTGCC 
GGCTGCGATC GCAACAACGA AGCTACCGAG AACGACGCCG TCGACGTCGG CGAAGCAGAA
ACCCCCGCTT CGAGCGGCTC AGCCGGCAGC GTCGGGAGCA CCTTGGGCGA CACGGCCGAC
CGGGCCGGCC AGGCGATTGA CGACGCGGCC GTCACGACCG CGGTCAAAGG GAAATATCTT
GCCGACGATA CGCTCAAAGG CCTCGATATT TCGGTCGATA CCGAGCAAGG AACCGTCACG
TTGACCGGGG CGGTGCAGGA CGACGCGGCG AAGCAACGCG CGACCGAGAT CGCACAGGGC
GTCGACGGCG TCGTCAACGT GGACAACCAG CTTACGATCC AGGGGAGCGA CGATCAGGCG
GCCACCGACC GCTGA
 
Protein sequence
MNGTRIATIA FAASLALFAA GCDRNNEATE NDAVDVGEAE TPASSGSAGS VGSTLGDTAD 
RAGQAIDDAA VTTAVKGKYL ADDTLKGLDI SVDTEQGTVT LTGAVQDDAA KQRATEIAQG
VDGVVNVDNQ LTIQGSDDQA ATDR