| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1616 |
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| Symbol | |
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| ID | 3673001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1698122 |
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| End bp | 1698730 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637710303 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_315374 |
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| Protein GI | 74317634 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0524891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGG CGATCGAGGA GCAGCTGGCG ACCAACCTGT ACTACGACCG CAATTTCGAC
TGCGAGACGG CCAAGATATT GCCGGGCGAG TACTACTTCA CGGCCAAGCC CATGCTCATC
GTCACGGTGC TCGGCTCCTG CGTCGCGGCC TGCATCCGAG ACCGCGTCTC CGGCATCGGC
GGCATGAATC ATTTCATGCT GCCCGACGGC GGCGGCGATC CGGGCAACCC GCTTTCGGCA
TCGATGCGCT ATGGCGCCTA CGCGATGGAG GTGCTGATCA ACCAGCTGCT CAAGGCCGGC
GCACGCCGCG AAAATCTCGA GGCCAAGGTA TTCGGCGGCG GCAACGTGCT GCGCGGTTTC
ACGACCATGA ACGTCGGCGA GCGTAATGCC CAGTTCGTGC GCGATTTCCT GCGCGCCGAG
AACATCCGCG TCGTGGCGGA AGACCTCAAC GACGTGCATC CGCGCAAGGT CTATTTCTTC
CCCCGGACCG GCAGGGTGCT GGTCAAGAAG CTGAAACAAC TCAACAACTA CACGCTGGTG
AAACGCGAAC AGGATTACGC GAGCCGCCTC AAGAGCAACG TCGTCGCGGG CGAGGTCGAT
CTGTTCTGA
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| Protein sequence | MNSAIEEQLA TNLYYDRNFD CETAKILPGE YYFTAKPMLI VTVLGSCVAA CIRDRVSGIG
GMNHFMLPDG GGDPGNPLSA SMRYGAYAME VLINQLLKAG ARRENLEAKV FGGGNVLRGF
TTMNVGERNA QFVRDFLRAE NIRVVAEDLN DVHPRKVYFF PRTGRVLVKK LKQLNNYTLV
KREQDYASRL KSNVVAGEVD LF
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