| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1612 |
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| Symbol | |
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| ID | 3672997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1694976 |
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| End bp | 1695764 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710299 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_315370 |
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| Protein GI | 74317630 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0247066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCC TTACCGACGC GCAGCTCAAC GTCTGGCTGA TCAGTTTCAT CTGGCCGCTC
ACGCGCATAC TCGGCCTCGT CATGGTGGCG CCGGTGTTTG GCCACCGCGC CGTTCCGGGC
CGGGTCAAGA TCGGCCTCGG CATCTTCATC GCGCTGATCG CGGCGCCTAC ACTGCCGCCG
ATGCCTGCGG TCGGGCTAGG TTCCTGGCAC GGCCTGTTCA TCCTGGTCCA GCAGTTTCTG
ATCGGCGTCG CCATCGGCTT CATCATGCGC ATCGTGTTCG CGGCCGTCGA AGCCGCTGGC
GAAATCATCG GCCTGCAGAT GGGTCTCGGC TTCGCGTCGT TCTTCGATCC GCAAAGCGCA
GGCCAGACCC TCGTGCTCGC GCGCTTCTTC AACATGCTCG CCGTGCTGCT GATGCTTGCG
GTCAACGCAC ATCTACTGCT CCTCGGCGTC CTCGTCGAGA GCTTCCAGAT CCTGCCGATC
AGCCACGAGC CGCTCGCCGC GGCGGGATTC CGCAACGTCG CGGCGTTCGG TACGACGATC
TTCTCGCTCG GCCTGCAACT CGCGCTGCCG CTGATCGCGA TCCTGCTAAT GACCAACCTC
ACGCTGGGCA TCCTCACCCG CTCCGCGCCG CAACTCAACA TCTTCGCGAT CGGTTTTCCG
ATCACGCTGG GCGTCGGCCT GATCATGCTC GACGTGACCC TGCCCTACTT CGCGCCGCAG
TTCGAACAGC TGATCGCGAG CGGGCTGGAC GCCGCGACGA GCGTCGTCCG CACCCTGCGT
CCTCACTAG
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| Protein sequence | MISLTDAQLN VWLISFIWPL TRILGLVMVA PVFGHRAVPG RVKIGLGIFI ALIAAPTLPP
MPAVGLGSWH GLFILVQQFL IGVAIGFIMR IVFAAVEAAG EIIGLQMGLG FASFFDPQSA
GQTLVLARFF NMLAVLLMLA VNAHLLLLGV LVESFQILPI SHEPLAAAGF RNVAAFGTTI
FSLGLQLALP LIAILLMTNL TLGILTRSAP QLNIFAIGFP ITLGVGLIML DVTLPYFAPQ
FEQLIASGLD AATSVVRTLR PH
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