Gene Tbd_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1590 
Symbol 
ID3672071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1676110 
End bp1677939 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content67% 
IMG OID637710277 
Productflagellin FliC 
Protein accessionYP_315348 
Protein GI74317608 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG TGATCAATAC CAACATCGCG TCGCTCAACG CGCAGCGCAA CCTCAATAGC 
TCCCAGGCAT CGCTGGCTAC GTCCCTGCAG CGCCTGTCCT CCGGCCTGCG CATCAACAGC
GCCAAGGACG ACGCGGCCGG TCTGGCGATT TCCGACCGTT TTACCACCCA GATTCGCGGC
CTGAACCAGG CAGCCCGTAA CGCCAACGAC GGCATCTCGC TTGCACAGAC AGCTGAAGGT
GCCCTGACCG AGACCGGCGC CAACCTGCAG CGTATCCGCG AACTGGCCGT CCAATCCGCC
AACTCGACCA ACTCGGCCTC CGACCGCAAG GCGCTCAACG CGGAAGTGCA GCAACTGCTC
GCGGAAGTGC AGCGCGTCGG TACCACGACA GAGTTCAACG GCCTGAAGCT GCTCGACGGT
ACCTTCAGCA ACGCCCAGTT CCAGGTCGGC GCCAATGCGA ACCAGACGAT CTCCGTGACC
GTTTCCGGCG CGACCACTGA CTTGATCGGC GCCTACCAGG CCACCGGCAA CGCAGTGACC
AGCGCTGCGT TCGATGGCTC GGGCTTCACC ATCAACGGCG TCGAAATCGG CGTTTCCGCA
GGCACCAGCG CGGCGGGCGT GACCGCGGAC AGCGCGACCG CCAAGGCCAC TGCCATCAAC
GCGAAAACCG GCGAAACCGG CGTCACCGCG ACTGCGAGCA GCAACGTCAC CGGATCGGGC
CCCACCGCCC GCTCGGGCCT CGCCAGCGGC GCCTTGCTGA TCAACGGGAT CGCCGTCGGC
GCGATCGCCG CTGACACCAA TGCAGTGACG CAGGGGCGCA ACGCCGCTAC CGCGATTAAC
GCCGTGTCCA ACCAGACCGG TGTCAGCGCG GTTGCCGATG CGACGACCGG CGCACTGACC
TTGTCGACGG CCGACGGTCG CAATATCGAG CTGACTTCGT CGCCTGCGAC CGCCGCCGGT
GCCCAAGCAA TCCAGAACGC CACGGGCCTT GACGTATCGG CCGGCAGCAA CGCAAGCGGC
AACGAAACCG CGACCCTGAC CTTTGCCGTT GCGAACGCCA ACGCCGCGGG CGGCATCACG
ACCGCGAACG GCGGCGGCGA CACCATCACG ATCGGTGAAA GGACTTACCA GTTCACGATC
GACGGCGTGG TTGCGGCAGG CAACGTTGCG GTGACACTGG CCGCCGGCGC TGCGGAAACG
GTAGCTATCG CCAATCTGAA GACCGCGATC AATGCCGAAT ATGCGGCTGG CCGTACGGCC
GTCCAAGGCG GCGCAACGAC AGCGACCAGT CTGGTGGTGA CCTCCAGCAA GCTCGGTACC
GGAACGCTAG CCATTGCCGA GACCGCAACC AACGCCGCTG CCATCGCGCC GGGCGCAGCC
AGCGGCGGCA CGGCGGCGGC TGACGGCAGC GGCATGACCA CGCGCGGCAC GCTGACGCTC
AGCTCACCCG AAAGCTTCAC GGTCGCTGGC GCCGACGTGG CCTACGGCGG CCTCGGTTCG
GTGTCCGCCT CGCTGACCAA GCTGAACACG GTGGACATCA GCACGGTGGC CGGCTCCAAC
GCCGCGCTTG CGGTCCTCGA CGGCGCACTG AGCCAGGTGA CGAGCCAGCG TGCCACGCTG
GGCGCGGTGC AGAACCGCTT CGCTTCGACC GTCTCGAACC TGCAGACGAC TGCGGAAAAC
CTCAGCGCAG CGCGCAGCCG TATCGTCGAT GCGGACTTCG CGGCCGAGAC CGCCAACCTG
ACGCGCGGCC AGATCCTGCA GCAGGCCGGC ACGGCAATGC TGGCTCAAGC GAATCAGCTG
CCGAACCAAG TGTTGTCGCT GTTGCGGTAA
 
Protein sequence
MAAVINTNIA SLNAQRNLNS SQASLATSLQ RLSSGLRINS AKDDAAGLAI SDRFTTQIRG 
LNQAARNAND GISLAQTAEG ALTETGANLQ RIRELAVQSA NSTNSASDRK ALNAEVQQLL
AEVQRVGTTT EFNGLKLLDG TFSNAQFQVG ANANQTISVT VSGATTDLIG AYQATGNAVT
SAAFDGSGFT INGVEIGVSA GTSAAGVTAD SATAKATAIN AKTGETGVTA TASSNVTGSG
PTARSGLASG ALLINGIAVG AIAADTNAVT QGRNAATAIN AVSNQTGVSA VADATTGALT
LSTADGRNIE LTSSPATAAG AQAIQNATGL DVSAGSNASG NETATLTFAV ANANAAGGIT
TANGGGDTIT IGERTYQFTI DGVVAAGNVA VTLAAGAAET VAIANLKTAI NAEYAAGRTA
VQGGATTATS LVVTSSKLGT GTLAIAETAT NAAAIAPGAA SGGTAAADGS GMTTRGTLTL
SSPESFTVAG ADVAYGGLGS VSASLTKLNT VDISTVAGSN AALAVLDGAL SQVTSQRATL
GAVQNRFAST VSNLQTTAEN LSAARSRIVD ADFAAETANL TRGQILQQAG TAMLAQANQL
PNQVLSLLR