| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1589 |
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| Symbol | |
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| ID | 3672070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1674329 |
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| End bp | 1675945 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637710276 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_315347 |
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| Protein GI | 74317607 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCA TGGAGCAGGT CCCGACCGGG GCGCCTAAAA TGGCCGAACC GACAGAAAAA
CTCAACCTTC CCGATCCGAC CGAGGTCGCG CGTGAAACGC TGCGCCGCTT GGCCATGCGA
CGGATCGCGC CGACGCCCGA CAATTACCAG ACCCTCTACG AGGAGATCGT CGGGCCGACC
GCGAGCGCCG CAGCGGCGGG TACCGCGACA GCGACGAGCG TGCTCGCCGG CCTGGCCATG
GACCTCACGC TGCATCACCC GGCCTTGGCG GCTTCGGCCG AGGCGCTGAA GCAGGCGCTG
CGCGCGAGCG ACTGGGCGCA ATGCCGAAAG CAGGTCGGGC AGATCGTCCT GCAGCTGAAG
CCGGGCGGGG GAAGCGGCCC GGGCCAGATC GACACCCTGG GCCTGTTGCG CGAGCTGCTC
GTCAAGACGC TCGAATTCGG CGTCGCGACG CAGCTTTCAC ACAACCCGAC GCTCTTCGAG
AAGACGCAGC GGCTGGCGGC AGCGGTTCGC GAGGCGAACA GCATCGCCGG CCTGCGCGAG
GCCGCGTCCG GCCTGAAAAG CATGTGGATC GACGTCGACC TGCATGTCTC GCATACGCAC
GACCAGCAGG AGACGCTCAG ACGCCTCCTC CTGCTGCTGG TGGAAAACAT CGGCGAACTG
CTCGACGACG ACACCTGGCT GCGCGGCCAG CTCGACGTCG TTCAGACCGT GATCACAGGA
CCGCTCAAGA TCCAGGCGCT GCTCGAGGCG GAAAAACGCC TCAAGGAGGT CATCTACAAG
CAGAGCCTGG TCAAGCACGG CCTGCGCGAG GCGACCGCGA CGCTCAAGGC GACGATGACG
AGCTTCGTCA GCCACATGAG CGACGCGGTC GCGGCGAATG ACGACTACCA GCAGACCATC
GCCGCGCACA TCGAACGGAT CAGCCGCACC GAAGACGTGC TCGAGCTGAA CCGCATTCTT
GAAAATCTGC TCGACGAAAC GCGCAGCGCC CAGTCCGACA GCCGCCGCGT CCACGCCCAG
ATGATCGAGG AACGCGACGC CGCCCAGCAT GCCGCCAATC ACATCAAGCA GCTCGAACTG
GAACTCGCCC AGATGAGCGC CCTGGTGCGC GAGGACCCGA TGACGCACAG CCTCAACCGG
CGCGGGCTCG ACGACGAGTT CGCCCGGGAG GCATCGCGCG CCGAGCGATT TAACACGCCT
TTCAGCATCG CCGTGCTCGA CGTCGACAAC TTCAAGGCAC TCAACGACCG GCGCGGCCAC
AACACCGGCG ACGAGGCGCT GATCCATCTG GTCAAGGTCG CCAAGGAAGA GCTGCGCCTG
AGCGACCACA TTGCACGCAT CGGCGGCGAA GAATTCCTGA TCATCCTGCC CAATACCCCC
GTCGCCGAGG CCGTACAGAT CGTCACCCGC CTGCAACGCA GCCTGACCAA GAAATATTTC
CTCGACAACA ACGAGCGCGT GCTGATCACC TTCAGCGCCG GCGTCGCCGA ACGTCGCGCC
GGCGAGACCC AGGAAGCCCT CATTGCGCGC GCCGACAGCG CCATGTACGA AGCCAAGCAC
AGCGGCAAGA ACCGCGTCTG CGTCGCGCCG GACGCGCTGC CGCAGGCTGC CGGATGA
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| Protein sequence | MRSMEQVPTG APKMAEPTEK LNLPDPTEVA RETLRRLAMR RIAPTPDNYQ TLYEEIVGPT
ASAAAAGTAT ATSVLAGLAM DLTLHHPALA ASAEALKQAL RASDWAQCRK QVGQIVLQLK
PGGGSGPGQI DTLGLLRELL VKTLEFGVAT QLSHNPTLFE KTQRLAAAVR EANSIAGLRE
AASGLKSMWI DVDLHVSHTH DQQETLRRLL LLLVENIGEL LDDDTWLRGQ LDVVQTVITG
PLKIQALLEA EKRLKEVIYK QSLVKHGLRE ATATLKATMT SFVSHMSDAV AANDDYQQTI
AAHIERISRT EDVLELNRIL ENLLDETRSA QSDSRRVHAQ MIEERDAAQH AANHIKQLEL
ELAQMSALVR EDPMTHSLNR RGLDDEFARE ASRAERFNTP FSIAVLDVDN FKALNDRRGH
NTGDEALIHL VKVAKEELRL SDHIARIGGE EFLIILPNTP VAEAVQIVTR LQRSLTKKYF
LDNNERVLIT FSAGVAERRA GETQEALIAR ADSAMYEAKH SGKNRVCVAP DALPQAAG
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