Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1568 |
Symbol | |
ID | 3672048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1650662 |
End bp | 1652689 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637710254 |
Product | excinuclease ABC subunit B |
Protein accession | YP_315326 |
Protein GI | 74317586 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGTCA CCTTTCCCGA TAGCCCGTTC CGTCTTTTTC AGCCCTTTCC CCCGGCCGGC GACCAGCCGA CGGCGATCGC CCGGTTGATC GAGGGGATCG ACGACGGCCT GTCGTACCAG ACCCTGCTCG GGGTGACCGG TTCCGGCAAG ACCTACACCA TGGCGAACGT GATCGCGCGC GCGGGGCGGC CGGCCCTGAT CATGGCGCCC AACAAGACGC TCGCCGCGCA GCTTTACGCC GAGATGCGCG AGTTCTTTCC GGAGAACGCG GTCGAGTACT TCGTCTCCTA CTACGACTAC TACCAGCCCG AGGCCTACGT CCCGGCGCGC GATCTCTTCA TCGAAAAGGA CTCGAGCATC AACGAGCACA TCGAGCAGAT GCGGCTCTCG GCGACCAAAT CGCTGCTCGA GCGGCGCGAC ACGGTCATCG TCTGCACCGT GTCGGCGATC TACGGTATCG GCGACCCGTC CGACTACCAC AGCATGATCC TGCTCCTGCG GCAGAACGAC AAAATGACGC AGCGCGAGGT CATCGCGCGC CTGACGCAGA TGCAGTACGA CCGCAACGAC GTCGACTTCA AGCGCGGCGT CTTTCGCGTG CGCGGCGACG TGATCGACAT CTTCCCGGCC GAACACGCCG AGACCGCGAT CCGCGTCGAG CTCTTCGACG ACGTGGTCGA GACGCTGCAT CTCTTCGATC CACTGACCGG CCAGATCCTG CAGAAGGTCT CGCGCTTCAC GGTCTTCCCG TCGAGCCACT ACGTCACGCC GCGTGAGACG ACGCTGCGCG CGATCGAGGC GATCAAGGTC GAGCTGCGCG AGCGCCTTGA CTGGTATTAC GCCAACAACA AGCTCGTCGA GGCGCAAAGG CTCGAGCAGC GCACGCGTTT CGACCTCGAG ATGATGGTCG AACTCGGCTT CTGCAAGGGC ATCGAGAACT ACTCGCGGCA TCTGTCGGGC CGCAAGGCCG GCGAGCCGCC GCCGACCCTG ATCGACTATC TGGCGAAGGA CGCGCTGATG TTCATCGACG AGTCGCACGT CACCGTGACC CAGGTCGGCG GCATGTACAA AGGCGACCGC TCGCGCAAGG AAAACCTCGT CGACTACGGT TTCCGGTTGC CCTCAGCGCT CGACAACCGG CCGCTGAAAT TCGAGGAATT CGAGGCGCTG ATGCCGCAGA CCGTGTTCGT CTCGGCGACG CCGGCGAAGT ACGAAGCCGA ACACGCGGGG CAGGTCGTCG AACAGCTCGT GCGCCCGACC GGGTTGATCG ACCCCATCGT CGAGGTGCGG CCGGTCACGA CCCAGGTCGA CGACCTCATG AGCGAGGTCA AGAAACGCGT GGCCGTGGGC GAGCGCGTCC TCGTCACGAC GCTGACCAAG CGCATGGCCG AGGACCTGAC CGACTACCTC GCCGAGCACG GCGTCAAGGT GCGCTACCTG CACTCCGACA TCGACACGGT TGAGCGCGTC GAGATCATCC GCGACCTGCG GCTCGGCGAG TTCGACGTGC TGGTCGGCAT CAACCTGCTG CGCGAGGGCC TCGACATCCC CGAGGTGTCG CTGGTCGCGA TTCTGGATGC CGACAAGGAG GGCTTCCTGC GCTCCGAGCG CTCGCTGATC CAGACCATCG GCCGCGCCGC GCGCCATCTG AACGGCACGG CGATCCTCTA CGCCGACCGG ATCACCGATT CGATGCAGCG CGCGATCGGC GAGACCGAGC GCCGGCGCGC CAAGCAGATC GCGTTCAATA CCGAACACGG CATCACCCCG CGCGGCGTCG TCAAGCGCAT CAAGGACATC ATCGACGGCG TCTACGATGC CGACGCCAGC CGCCAGGAAC TCAAGGCCGC GCAGACCGCC GCGGAATACA AGGTCATGGA CGAGAAATCC CTGACCAAGC GAGTCAAGAA GATAGAGAAG GAAATGCAGG ACGCGGCGAA GAACCTCGAG TTCGAAAAGG CCGCGGTGCT GCGGGATCAG TTGAAGGAGC TGAAGGCGTT GCTGTTCGGG GTGGAGGAGC GGGAGTAG
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Protein sequence | MFVTFPDSPF RLFQPFPPAG DQPTAIARLI EGIDDGLSYQ TLLGVTGSGK TYTMANVIAR AGRPALIMAP NKTLAAQLYA EMREFFPENA VEYFVSYYDY YQPEAYVPAR DLFIEKDSSI NEHIEQMRLS ATKSLLERRD TVIVCTVSAI YGIGDPSDYH SMILLLRQND KMTQREVIAR LTQMQYDRND VDFKRGVFRV RGDVIDIFPA EHAETAIRVE LFDDVVETLH LFDPLTGQIL QKVSRFTVFP SSHYVTPRET TLRAIEAIKV ELRERLDWYY ANNKLVEAQR LEQRTRFDLE MMVELGFCKG IENYSRHLSG RKAGEPPPTL IDYLAKDALM FIDESHVTVT QVGGMYKGDR SRKENLVDYG FRLPSALDNR PLKFEEFEAL MPQTVFVSAT PAKYEAEHAG QVVEQLVRPT GLIDPIVEVR PVTTQVDDLM SEVKKRVAVG ERVLVTTLTK RMAEDLTDYL AEHGVKVRYL HSDIDTVERV EIIRDLRLGE FDVLVGINLL REGLDIPEVS LVAILDADKE GFLRSERSLI QTIGRAARHL NGTAILYADR ITDSMQRAIG ETERRRAKQI AFNTEHGITP RGVVKRIKDI IDGVYDADAS RQELKAAQTA AEYKVMDEKS LTKRVKKIEK EMQDAAKNLE FEKAAVLRDQ LKELKALLFG VEERE
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