| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1564 |
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| Symbol | |
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| ID | 3672044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1646206 |
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| End bp | 1648827 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710250 |
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| Product | RNAse E |
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| Protein accession | YP_315322 |
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| Protein GI | 74317582 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.270508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA TGCTTTTCAA CGCAACCCAG GCGGAAGAAC TCCGGGTTGC CATCGTCGAC
GGGCAAAAGC TCGTCGACCT TGACATCGAG TCCGCCAGCA AGGAACAACG CAAGGGCAAC
ATCTACAAGG GTGTCGTCAC CCGCGTCGAG CCCAGCCTCG AGGCCGCGTT CGTCGACTAT
GGCTGCGAGC GCCACGGCTT CCTGCCGTTC AAGGAAATCG CCCGCTCGTG TCTGCCCAAT
GGCGGCCGCG TCCCCGAGAA CCTCAAGGAA GGCCAGGAAC TGCTGGTCCA GGTCGAGAAG
GACGAGCGCG GCAACAAGGG CGCAGCACTG ACCACCTACG TCTCGCTCGC CGGCCGCTAC
GTCGTGCTGA TGCCGACCAA CCCGCGCGGC GGAGGCGTCT CGCGCCGCAT CGAAGGCGAA
GAGCGCAACG AACTGCGCGA CACGCTGGCG CAGCTCGACA TCCCCGAAGG CATGAGCCTG
ATCGCGCGCA CCGCCGGCAT CGGTCGGACT GCCGAAGAAT TCCAGTGGGA CCTGAACTAT
CTCCTGAGCC TGTGGAAGGC GATCGACGGC GCCTCGACGT CGATGTCGGG CGCCTTCCTG
ATCTACCAGG AAGGCAGCCT CGTGATCCGC GCGATCCGCG ACTACTTCTC GGCCGACATC
GGCGAAATCC TGATCGACAC CGAAGACATC TACGAGCAGG CGCAGCAGTT CATGGCGCAC
GTGATGCCGG CCAACGTCAA CAAGGTCAAG CTCTACCGCG ACGACGTGCC GCTGTTCTCG
CGCTTCCAGA TCGAGCACCA GATCGAGTCG GCGTTCTCGC GCCAGGTCAA CCTGCCGTCG
GGCGGCGCGA TCGTCATCGA CCATACCGAG GCGTTGGTGT CGATCGACGT CAACTCGGCG
CGCGCGACCA AGGGCAGCGA CGTCGAGCAG ACCGCTTACA ACACCAACCT CGAAGCGGCC
GACGAAGTGG CCCGCCAGAT GCGTCTGCGC GATCTCGGTG GCCTGATCGT GATCGATTTC
ATCGACATGG AGAACCCCAA GCATCAACGC GAGGTCGAGA ACCGCCTGCG CGATGCGCTC
CATCACGACC GCGCGCGCGT GCAGACCGGC AAGATCTCGC GCTTCGGCCT GCTCGAAATG
TCGCGCCAGC GGCTGCAGCC CTCGCTCGGC GAGACCAGCT ACAACCCCTG CCCGCGCTGC
CACGGCACCG GCCACATCCG CGGCACCGAG TCGTCGGCTT TGCACATCCT GCGCATCCTG
CAGGAAGAGG CGATGAAGGA GAACACCGGC GCCGTGCACG TCCAGCTGCC GGTCGACGTC
GCGACTTTCC TGCTGAACGA AAAACGGCCC GACATCCACA CGGTCGAGTC GCGCCTCAAG
GTCAACGTGG TGTTGATCCC CAACATCCAC ATGGAGACCC CGCACTACAC AATCACGCGT
CTGCGCCACG ACGAACTGAA CGTCGCCGGC GCGGCCGAGC CGAGCTACAA GATGGCGCTG
GTGCCGGAAA CCGAAGCGAT CTACCAGACC GCCCAGGCCG CCGCACCTTT ACGCCAGGAA
GCCGCGGTCA AGTCGATTCC GCCGCCGCAA CCGACCGTCG CGCCGCGCCC CGTCGTGCCG
GCGAGCGAGC CCGCGCCCGC GGGCCTCTTC GACCGCATCT TCGGCTGGTT CAAGAAACGC
GGCGACGAGA CGCACGCGCC AGAAGCGGCG CCCGCGGCAG AAGCGGTGCC CGCGATCGTG
CGCAGTGAAC GTCCGAGCGA GCGCCGCGAG CGTGAACGCA AGCCGGGGCA GCGCCGCGGT
CGCGGTGAAG GCCGCGAAGG GCGCGAGGGT CGGAACGGCG AGGGCCGCAA TGGCGAAGCA
CGCCAAGGCG AGTCGCGCCA AACCGAGCCG CGCCAGCCCG AAGTGCGCGA GCCGCGCGCC
GAGCAGGCGA AACCGCCGCG CCCGCCGCGT CAACCCAAGC CTCGCCCCGA GGCGGAAGTT
GCCCCCCGCG CCGCGACTGC GCCCGTTGCC GAGGAACCCG CCGGCGAGGA AAAGCGCGAG
CCGCGCAGCC GTCGTGGCCG CGGTCGTCGC GGTCGTGGCG AAGGCCGCAG CGAAGCAGCG
GCGAACGGCA GCGCGACCCC GCGCGCCGTG ATCGAAATCG CCGGCTATCG GGCGGTCATC
GAACTTGCGC GGCCCGCCCG CCCGGCGCCG GCCGCGGCAG CCCCGGTTGC AGCCGCGGCC
GAGCCTGCCG CGGCGCCGGC TCCGTCGCAG CAGGCCCTGC AACTCGATGC GCCTACCCCG
GCCACCAAAC CGGCCCCGGG TGCGGTGACT GCATCGCCCG CGGAAATTCT CGCCGCGCTC
GCAGCCGGCG AAGCCGAACT GCAACAGGTC GAGACCCGCT CGGCGGCCGC CGCTGCGGCG
GATGGAAGCG AGCCGAGCCG GCCCCGTCGG CGTCGCCGTC CGTCGGTCAA GGCCGACGCC
GAGCCGGTGA GCCTGATGCA GGTCGAGACC AGCGCGCCGA TCGAAGTCCC GGTGGACGCT
CCTGCGCCGG CCGCGGGGCC TCACCCGACG CGTCGCCGCC CGCGCCCGCA GCCGAGCGCA
CCGCAGGAAC CGCTGGTGCA GGTCGAAACG CAGGCGAAGT AA
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| Protein sequence | MKRMLFNATQ AEELRVAIVD GQKLVDLDIE SASKEQRKGN IYKGVVTRVE PSLEAAFVDY
GCERHGFLPF KEIARSCLPN GGRVPENLKE GQELLVQVEK DERGNKGAAL TTYVSLAGRY
VVLMPTNPRG GGVSRRIEGE ERNELRDTLA QLDIPEGMSL IARTAGIGRT AEEFQWDLNY
LLSLWKAIDG ASTSMSGAFL IYQEGSLVIR AIRDYFSADI GEILIDTEDI YEQAQQFMAH
VMPANVNKVK LYRDDVPLFS RFQIEHQIES AFSRQVNLPS GGAIVIDHTE ALVSIDVNSA
RATKGSDVEQ TAYNTNLEAA DEVARQMRLR DLGGLIVIDF IDMENPKHQR EVENRLRDAL
HHDRARVQTG KISRFGLLEM SRQRLQPSLG ETSYNPCPRC HGTGHIRGTE SSALHILRIL
QEEAMKENTG AVHVQLPVDV ATFLLNEKRP DIHTVESRLK VNVVLIPNIH METPHYTITR
LRHDELNVAG AAEPSYKMAL VPETEAIYQT AQAAAPLRQE AAVKSIPPPQ PTVAPRPVVP
ASEPAPAGLF DRIFGWFKKR GDETHAPEAA PAAEAVPAIV RSERPSERRE RERKPGQRRG
RGEGREGREG RNGEGRNGEA RQGESRQTEP RQPEVREPRA EQAKPPRPPR QPKPRPEAEV
APRAATAPVA EEPAGEEKRE PRSRRGRGRR GRGEGRSEAA ANGSATPRAV IEIAGYRAVI
ELARPARPAP AAAAPVAAAA EPAAAPAPSQ QALQLDAPTP ATKPAPGAVT ASPAEILAAL
AAGEAELQQV ETRSAAAAAA DGSEPSRPRR RRRPSVKADA EPVSLMQVET SAPIEVPVDA
PAPAAGPHPT RRRPRPQPSA PQEPLVQVET QAK
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