Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1563 |
Symbol | |
ID | 3672043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1644823 |
End bp | 1645791 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637710249 |
Product | ribosomal large subunit pseudouridine synthase C |
Protein accession | YP_315321 |
Protein GI | 74317581 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.151804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA ATGACTTAGA GAAAGATTCG GTCCGGCGTC TGAAGATTGA CGAGGGCGCC GACGACCAGC GACTCGACAA TTATCTGATG GCGCGCCTCA AAGGCGTTCC CAAAAGCCGC ATCTACAAGC TCGTGCGCGG CGGCGAGGTG CGGATCAACG GCGGGCGCGT CGACGTCGGC TACCGCCTCA AGGTCGGCGA CGAGGTGCGG ATTCCGCCGG TGCGGATGGC CGCGCCGGTG ATCACGCCGG CGACGCACCT GCCGCAGGGC GGGCTGCGCC TGTTGCCGCT GATCCTCTAT CGCGACGACG CCCTGATCGC GTTGAACAAG CCTGCGGGCA TGGCCGTCCA CGGCGGCAGC GGCATTTCGC GCGGCGTCAT CGAGCAGCTA CGTCTCGAGC TGCCGGAATG CCGCTACATG GAGCTCGTCC ATCGGCTCGA CCGCGAAACC TCGGGCGTGC TGCTCGTCGC GCTCAAGCGT CGCGCGCTCG TTGGGCTGCA CGCGGCCATG CGCGACGGCA AGATCGAAAA ACGCTACCTC ACGCTGGTCG CCGGGCGCTG GCCCAATCCG CTTCAGCACG TGAAGCTGCC GCTGCACAAA CGCGTCACCG AGGAAGGCGA GAAGCGCGTG ACCGTGCGCG ACACCGGCCA GACCGCGCAC ACGATCTTCC GCCGCCTGCG GGGCTACGCC GAGTTCACAC TGCTCGAAGC GGAATTGAAA ACCGGCCGCA CCCATCAGAT TCGCGTGCAT ACCTCGCACC TCGGTTTTCC GATCGCCGGA GACGACAAAT ACGGCGATTT CGAACTCAAC AAGCGGTTGG CGAAGCGCGG ACTCAAGCGC ATGTTCCTGC ACGCCGCCAA GCTCGCGTTC GCCCACCCGA TCTCGGGCGA GCGCATGACG ATCGAGGCGC CTTTACCCGC CGACCTTGCG ACCTTTCTGG ACACGCTCGA CCATGCCCAA GCAATTTGA
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Protein sequence | MKKNDLEKDS VRRLKIDEGA DDQRLDNYLM ARLKGVPKSR IYKLVRGGEV RINGGRVDVG YRLKVGDEVR IPPVRMAAPV ITPATHLPQG GLRLLPLILY RDDALIALNK PAGMAVHGGS GISRGVIEQL RLELPECRYM ELVHRLDRET SGVLLVALKR RALVGLHAAM RDGKIEKRYL TLVAGRWPNP LQHVKLPLHK RVTEEGEKRV TVRDTGQTAH TIFRRLRGYA EFTLLEAELK TGRTHQIRVH TSHLGFPIAG DDKYGDFELN KRLAKRGLKR MFLHAAKLAF AHPISGERMT IEAPLPADLA TFLDTLDHAQ AI
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