Gene Tbd_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1554 
Symbol 
ID3672034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1637431 
End bp1637850 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content63% 
IMG OID637710240 
Producthypothetical protein 
Protein accessionYP_315312 
Protein GI74317572 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.576052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0687632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGC CTGTTGAAAT CGATCCCCGG CGTTTTTGCA GGGAGTCCCG GTCCTGGGAA 
GCGCGGTCGG ACGTCTCGGC GTTTCCGCGC CTTGCCCACG AATTTACGCA AGGTGAGTTG
TCCTGTCGAG TGGCCGGGCG AAGCGACGCA CGCGGCGGCC TGTCGCTGCA GTTGACGGTA
CGCGGCGAGG TCGAGTTGAC CTGTCAACGC TGTCTCAACG GCATGCGGCA TGAGGTCGAC
ATCGATCGCG TCGTTCACCT GGCGCGCAAC GAGAGCGAGC TCGAGCGGCT GGATGCGCTG
CCCGGCAGTG ATGCGATTTT GGTCGGCGAG ACACTCGATC TCGTCGGTTT GCTTGAGGAT
GAAGTGCTGT TGAGCCTGCC GTTGGCGGCG ATGCACGCGG AAGGTGAATG CCCCGTCTGA
 
Protein sequence
MLQPVEIDPR RFCRESRSWE ARSDVSAFPR LAHEFTQGEL SCRVAGRSDA RGGLSLQLTV 
RGEVELTCQR CLNGMRHEVD IDRVVHLARN ESELERLDAL PGSDAILVGE TLDLVGLLED
EVLLSLPLAA MHAEGECPV