Gene Tbd_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1535 
Symbol 
ID3672014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1620099 
End bp1620803 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID637710220 
Producthypothetical protein 
Protein accessionYP_315293 
Protein GI74317553 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.132727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGC GCGTCGTCGT CAAGGGTCTG GGCTTGATTC TGAGCCTCGC GCTCCTCGGT 
TACCTGTTCA ACGCCAGCGA CCTCGGCAAC AGCGTCAACG AAGCCTGGAT CGACGCGCGG
GTGCGCGGCC ACGGCGTCGA GGGCGCGCTG ATGTTCTTGC TGATGGGGGC GCTGTTCACG
GCCATCGGAC TGCCGCGGCA GGTCATCGCC TTTCTCGGCG GCTACGCCTT CAACATCGCG
CTCGGTACGC TGCTCGGTGC ACTGGCCGCG CTCCTCGGCT GCGCAGTGAG CTTCGCGTAT
GCGCGCTTCT TCGGCAAGGA TTTCGTGCGC GCGCGGCTGG GCGCGCGGGC GCGCCGTTTC
GACGGCTTCA TTCGCGATCA CCCGTTCTCG ATGACTGTGC TGATTCGCCT GCTCCCGGTC
GGGAGCAATT TGCTGACCAA TCTCGCCGCC GGTATCTCGA GCATTCGACC GACGCCTTTC
TTTGCCGGCA CGCTGCTCGG CTATGTCCCG CAGACCTTGG TGTTTGCGCT CGTCGGCAGC
GGCGTCCATA TCGCCCCGAT GACCAAATTG ATTCTGGCGA TCGGTTTGTT CGTGGTTTCA
AGCGGACTCG GTGTGTATCT CTACCAGCAT TTTCGGCGCG GACCCGGCCT CGACCAGGAA
ATCGACGCGG CGCTCGAACC CCGGCGGGGG CACGATGTCA CGTAG
 
Protein sequence
MNARVVVKGL GLILSLALLG YLFNASDLGN SVNEAWIDAR VRGHGVEGAL MFLLMGALFT 
AIGLPRQVIA FLGGYAFNIA LGTLLGALAA LLGCAVSFAY ARFFGKDFVR ARLGARARRF
DGFIRDHPFS MTVLIRLLPV GSNLLTNLAA GISSIRPTPF FAGTLLGYVP QTLVFALVGS
GVHIAPMTKL ILAIGLFVVS SGLGVYLYQH FRRGPGLDQE IDAALEPRRG HDVT