| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1525 |
|---|
| Symbol | |
|---|
| ID | 3672004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1612617 |
|---|
| End bp | 1613819 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637710210 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_315283 |
|---|
| Protein GI | 74317543 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0769059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCCG ATCGCGTTCT TTCCGGCATG CGCCCCACCG GGCGTCTGCA TCTCGGCCAC
TATCACGGCG TGCTCAAGAA CTGGCTGCGC CTGCAGAACG AGTACCAGTG CCTGTTCTTC
GTCGCCGACT GGCATGCGCT GACGACCCAC TACGACGCGC CGCAGGCGAT CGACCAGAAC
GTGCGCGACA TGGTCGTCGA CTGGCTCGCG GCCGGCATCG ATCCTGCGCA GGCCACGCTC
TTCGTGCAAT CGCGCGTGCT CGAACACGCG GAACTGCATC TGCTGCTGTC GATGATGACG
CCGCTCGGCT GGCTCGAACG CGTGCCGACC TACAAGGACC AGCAGGAAAA ACTCAGCGAG
AAGGATCTTT CGACCTACGG CTTCCTCGGC TATCCGCTGC TGCAGAGCGC CGACATCCTG
ATCTACCGCG CCAACCTCGT GCCGGTCGGC GAGGATCAGG TGCCGCACAT CGAGTTCACG
CGCGAGATCT GCCGTCGTTT CAACCACCTC TATGGTCGCG AGCCGGGGTT CGAGGACAAG
GCGCGGTCCG CGGTCAAGAA ACTCGGGTCG AAGAAGGCGC GTGTCTACGA GGAATGCCGC
ACCGCATATC AGGAGAAGGG CGACCAGGAG GCGCTGGAGT CGGCACGGGC CCTGTTGAAC
GACGCGCAGA ACCTGTCGAT GAACGACCGC GAGCGGCTTT TCGGCTATCT CGAGGGCTCG
GGCAAGATGA TCCTCGCCGA GCCCGAATCC CTGCTCACCG AAGCATCGAA AATGCCGGGT
CTCGACGGGC AGAAGATGTC GAAGTCCTAC GGCAACACGA TCGCACTGCG CGAAGACCCA
GACGTTGTGG CGAAGAAGAT CCGCACCATG CCGACCGATC CGGCGCGGGT CCGCCGCACT
GACGCGGGCA ATCCGCTGAA CTGCCCGGTG TGGCAGTTCC ATCTCGTGTA TTCCGACGAC
AACGTGCGCC AGTGGGTGAC GGCCGGTTGC ACCAGCGCCG GTATCGGCTG CATCGAATGC
AAGCAGCCCG TGATCGATGG CGTGCTCGCC GAGCTTGTGC CGATTCGCGA GCGGGCGCAG
TACTACGAGG ACAACCCCGA CCAGGTGCGC AACATCCTCG CCGACGGTAG CGAGAAGGCA
CAGGAACTCG CGCGCGACAC GATGCGCGAC GTGCGCGAGT CGATGGGACT GACCTTCGGC
TGA
|
|---|
| Protein sequence | MYSDRVLSGM RPTGRLHLGH YHGVLKNWLR LQNEYQCLFF VADWHALTTH YDAPQAIDQN
VRDMVVDWLA AGIDPAQATL FVQSRVLEHA ELHLLLSMMT PLGWLERVPT YKDQQEKLSE
KDLSTYGFLG YPLLQSADIL IYRANLVPVG EDQVPHIEFT REICRRFNHL YGREPGFEDK
ARSAVKKLGS KKARVYEECR TAYQEKGDQE ALESARALLN DAQNLSMNDR ERLFGYLEGS
GKMILAEPES LLTEASKMPG LDGQKMSKSY GNTIALREDP DVVAKKIRTM PTDPARVRRT
DAGNPLNCPV WQFHLVYSDD NVRQWVTAGC TSAGIGCIEC KQPVIDGVLA ELVPIRERAQ
YYEDNPDQVR NILADGSEKA QELARDTMRD VRESMGLTFG
|
|---|
| |