Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1522 |
Symbol | |
ID | 3672001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1610025 |
End bp | 1610822 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637710207 |
Product | glutamate racemase |
Protein accession | YP_315280 |
Protein GI | 74317540 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.167317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.205372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACGA ATGCACACTC CCCCATCGGC GTATTCGACT CCGGCATCGG CGGGCTGACG GTCGTGCGCG CGCTCATGGA GCGGCTTCCC TACGAGAACA TCGTCTATTT CGGCGACACC GCGCGCGTGC CCTACGGCGT GAAATCGGTC GAGACGATCG CCCACTTCAC GACGCAGATC GCGCAGTTCC TGCTGGAAAA GGACGTCAAG CTGCTCGTCA TCGCGTGTAA CACGATGGCT GCCGTCGCCG CGCAGGTCGT CAAGGACCTG TCGCCGGTGC CCGTCCTCGA CGTGATCGAC GCCGGCGCGG CCTCGGCACG CGGTGGAAAA AAGATCGGCG TCATCGGCAC GCCGACGACG ATCAACAGCA ACGCTTACGC GCGCGCCATC CACGACTACG CGCCCGACTC GCGCATCCAT TCACAGGCCT GCCCGCTGTT CGTTCCGCTG GTCGAGGAAG GCTGGCTCGA CAACGAGGTG ACGCGCCTGA CCGCGCAGGA TTACATGAAG CCGCTCCTGG CCGAGCACAT CGACACGCTC GTGCTCGGCT GCACCCATTA CCCGCTGCTC AAACCCTTGC TGCGCGAAGT GGTGGGCGAC GGTGTCGCGC TCGTCGATTC CGCGGAAGCG ATGGCCGAGC AGGTCGCGGC TGTTCTCGCC GAGAAAAGTC TCGCCAATCC CGGGCCGGCG CAACCGCGCT ACGACTTCTA CGTCACCGAC GTGCCGCTGC GCTTCCAGAC GATAGGCGAA CGCTTTCTCG GGCGCACGCT CAACAACGTG CACCTCGTGA AGTGGTGA
|
Protein sequence | MSTNAHSPIG VFDSGIGGLT VVRALMERLP YENIVYFGDT ARVPYGVKSV ETIAHFTTQI AQFLLEKDVK LLVIACNTMA AVAAQVVKDL SPVPVLDVID AGAASARGGK KIGVIGTPTT INSNAYARAI HDYAPDSRIH SQACPLFVPL VEEGWLDNEV TRLTAQDYMK PLLAEHIDTL VLGCTHYPLL KPLLREVVGD GVALVDSAEA MAEQVAAVLA EKSLANPGPA QPRYDFYVTD VPLRFQTIGE RFLGRTLNNV HLVKW
|
| |