Gene Tbd_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1521 
Symbol 
ID3672000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand- 
Start bp1609333 
End bp1609947 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID637710206 
Producthypothetical protein 
Protein accessionYP_315279 
Protein GI74317539 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.164003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.204362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGT GCGGCTGCGA TTCGGTGTGC GAGGCGCCCG CGCCCGATCC GGGTTACCGG 
CGGGCGTTGT GGCTTGCGCT CGTGCTGAAC GTCCTGATGT TCGTGGTCGA GCTGGGCGCG 
AGCTTCTCTG CGCAGTCGGT CTCGCTGCTA GCCGACGCGG TCGATTTCCT CGGCGACGCC 
GGTAACTACG GCGTCGCGCT CTTCGTGCTC GGACTCGCAC CCGTCTGGCG CTCGCGCACC 
GCGCTATGGA AGGGTTGGCT GATGATCGGC TACGGCGTCT TCGTGCTCGG CAAGTCGGCC 
TGGCAGTGGT CAGCGGGCGT CGTGCCCGAG CCGGTCATCA TGGGCTGGGT GAGCCTGTTG 
GCGCTGGCCG TGAACGTCGG CGTCGCCGCG CTGCTGTACG CGCACCGCCG CGGCGACGCG 
CAGGCCCGCT CGGTGTGGCT GTGCTCACGC AACGACGCGC TCGGCAATCT CGCGGTCATC 
GGCGCGGCCG GCGGCGTATG GGTGACGGCC CACGGCTGGC CCGACATCGG GGTTGCCGTG 
GTGCTGGCCG GGCTGGCCCT GAGCTCAGGC GCCTCGGTGG TGCGACACGC CCGCGCCGAA 
TTGCGCGGCG CCTAG
 
Protein sequence
MSGCGCDSVC EAPAPDPGYR RALWLALVLN VLMFVVELGA SFSAQSVSLL ADAVDFLGDA 
GNYGVALFVL GLAPVWRSRT ALWKGWLMIG YGVFVLGKSA WQWSAGVVPE PVIMGWVSLL 
ALAVNVGVAA LLYAHRRGDA QARSVWLCSR NDALGNLAVI GAAGGVWVTA HGWPDIGVAV 
VLAGLALSSG ASVVRHARAE LRGA