Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1519 |
Symbol | |
ID | 3671998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1606593 |
End bp | 1607849 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637710204 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_315277 |
Protein GI | 74317537 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.113628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.370562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGCC GCGAGCGCGT TGGGGGGTCG ATATCTGGAG AGGTGCTGCG CGCCGTGTTA AGAATCTTCC TGCTGTGTGC CGTGTTGTTG CCGGGCTGGG CGCAGGCGCT CCAACTTTCT GCGAGTCGGG TCTGGCCCTC CCCGGACTAC ACCCGCGTCA CCCTCGAAGC GCAGGCGCCC GTCGTCCATA CCTATTTCAC CCTTGCCAAG CCCGACCGGC TCGTGATCGA TCTCGAGGGC GTCGAGGCCG GTCCGGCGCT CGACGCGCTG ATGACGCAGC TGAGCGCTGA CGATCCTTAC GTCGGCGCGA TCCGCAGCGG CGTGAACCGG CCCGGTGTGA TGCGTCTGGT GCTCGAACTC AAGGCCGCGG TCCGGCCCTC GATCTTCCAA TTGCCCCCCC TCGGGGAGTA TGGCCATCGG CTCGTGATCG ACCTGTACCC GGCCGAGGCG CGCGCTGCGG CCGTCAGCCC GGCGGCGCTC CATCCCGAAG GCCGCACGCC GCAGAAGGCG GCCAAGCCCG AAGCGGCCGG GCAGTACGTG CGGCTGATCA CGGTCGCGAT CGACGCGGGC CACGGCGGCG AGGACCCCGG CGCACTCGGC GCCGCCGGCT CACGGGAGAA AGACATCACG CTCGCGCTGG CGAAGAAGCT CAAGCAGAAG ATCGACGCCC AGGAAAACAT GCACGCGGTG CTGACCCGCG ACGGCGATTA TTTCGTGCCG CTCGGACAGC GCGTGACCAA GGCGCGCTCG TTCAAGGCCG ACCTCTTTCT GTCGATCCAC GCCGACGCCT TCATCAAGCC GCACGCCCGC GGGTCGTCGG TGTTCGCGCT GTCCGAGAAC GGGGCGACCT CGGTCGCGGC GCGCTGGCTC GCCAGGAAGG AAAACGAGGC CGACCTGATC GGTGGCATCA ACATCGACGT CAAGGATCCG TTCCTCAAGC GTACGCTGCT CGACCTGTCG CAGACTGCGA CGATCAACGA CAGTCTCAAG CTTGGCCACG CCGTGCTCAA GGAAATCGGC GGCGTCAACA CCTTGCACAA GGCGCAGGTC GAACAGGCAG GGTTCGCCGT GTTGAAGGCG CCCGACATCC CGTCAATCCT GATCGAGACC GCGTTCATTT CCAATCCCGA AGAAGAAAAG CGCCTCAACG ACGCGGCCTA CCAGGACAAG CTGGTCGATG CGATCGTCGT CGGCGTCAAG GATTATTTCG CCAGACACCC GCTGACCGGG CCGTCGCGGC TGACGCGCAA TCCATGA
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Protein sequence | MRGRERVGGS ISGEVLRAVL RIFLLCAVLL PGWAQALQLS ASRVWPSPDY TRVTLEAQAP VVHTYFTLAK PDRLVIDLEG VEAGPALDAL MTQLSADDPY VGAIRSGVNR PGVMRLVLEL KAAVRPSIFQ LPPLGEYGHR LVIDLYPAEA RAAAVSPAAL HPEGRTPQKA AKPEAAGQYV RLITVAIDAG HGGEDPGALG AAGSREKDIT LALAKKLKQK IDAQENMHAV LTRDGDYFVP LGQRVTKARS FKADLFLSIH ADAFIKPHAR GSSVFALSEN GATSVAARWL ARKENEADLI GGINIDVKDP FLKRTLLDLS QTATINDSLK LGHAVLKEIG GVNTLHKAQV EQAGFAVLKA PDIPSILIET AFISNPEEEK RLNDAAYQDK LVDAIVVGVK DYFARHPLTG PSRLTRNP
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