| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1496 |
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| Symbol | |
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| ID | 3672909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1586860 |
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| End bp | 1588188 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710181 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_315254 |
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| Protein GI | 74317514 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.410866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCCCC AGGACCTCTT CTCGACCGAA CCCGCCGCCG CGCCTGCGCC TGACCCGCAC
GCGCCGCTCG CCGAGCGCCT GCGCCCGCGC ACGCTCGACG ACGTCGTCGG GCAGAGTCAC
CTGCTCGGCC CCGGCAAGCC GCTCAGGCTC GCGTTCGACT CGGGCAAGCT GCATTCGATG
ATCCTCTGGG GGCCGCCCGG CGTCGGCAAG ACCACGCTCG CCCGGCTCAC TGCGCAGGCC
TTCGGCGCCG ATTTCATCGC GATCTCGGCC GTGCTCTCCG GCGTGAAGGA CATCCGCGAG
GCGGTCGAAC GCGCGCGCAT GAACCAGAAG CTCGGCCGTG CGACGATACT CTTCGTCGAC
GAGGTCCACC GCTTCAACAA GTCGCAGCAG GACGCCTTCC TGCCGCACGT CGAATCGGGC
CTTTTCACCT TCATCGGCGC GACCACCGAG AACCCCTCGT TCGAGGTCGT CGGCGCGCTC
TTGTCGCGCG CCCAGGTCTA CGTGCTGAAA TCGCTCACGC CCGACGAGCT CGGCCGCCTC
ATGCAGCGCG CGCTGCAGGA ACTGCCGTCG CTCAAGCTCG CCGACGGCGT CGACAAGCTG
CTGGCCGCCT ACGCCGACGG CGACGCGCGC AAATTGCTCA ACCTGCTCGA GCAACTCGAC
ACCGCCGCGC GCACCGCGCA GGTCGAAGAA GCCGACGCGG CCTTCGTCGA GAACGCGCTC
GCGCAGTCGC TGCGCCGCTT CGACAAAGGC GGCGAAGCCT TCTACGACCA GATTTCGGCG
CTGCACAAGA GCGTGCGCGG CTCTGACCCC GACGCGTCGC TCTACTGGCT CGTGCGCATG
CTCGACGGCG GCGCCGACCC GCGCTACCTC GGCCGGCGAC TCGTGCGCAT GGCGAGCGAG
GACATCGGGC TGGCCGATCC GCGCGCCTTG AGACTGGCGC TCGACGCGGT CGAAACCTAC
GAACGCCTCG GCTCGCCCGA AGGCGAACTC GCGCTCGCCG AGGCCTGCCT CTATCTGGCC
TGCGCACCCA AGAGCAACGC CGCCTACGTC GCCTACAACG CCGCGCGCGC GTTCGTGGAG
GCCAACCCGT CGAACGACGT GCCGATCCAC CTGCGCAACG CGCCGACCAA GCTCATGAAG
GAACTCGGCT ACGGGCGCGC CTATCGCTAC GCTCACGACG AGCCCGAAGC CTACGCCGCC
GGCGAGCGCT ACTTCCCCGA CGACATCGCG GAACAGCAGT TCTACGAACC GACCCCGCGC
GGGCTCGAAG GCAAGATCGC CGAGAAGCTC GCGCATCTGC GAGAGCTCGA CGACGAGGCG
GAAAAGTAG
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| Protein sequence | MCPQDLFSTE PAAAPAPDPH APLAERLRPR TLDDVVGQSH LLGPGKPLRL AFDSGKLHSM
ILWGPPGVGK TTLARLTAQA FGADFIAISA VLSGVKDIRE AVERARMNQK LGRATILFVD
EVHRFNKSQQ DAFLPHVESG LFTFIGATTE NPSFEVVGAL LSRAQVYVLK SLTPDELGRL
MQRALQELPS LKLADGVDKL LAAYADGDAR KLLNLLEQLD TAARTAQVEE ADAAFVENAL
AQSLRRFDKG GEAFYDQISA LHKSVRGSDP DASLYWLVRM LDGGADPRYL GRRLVRMASE
DIGLADPRAL RLALDAVETY ERLGSPEGEL ALAEACLYLA CAPKSNAAYV AYNAARAFVE
ANPSNDVPIH LRNAPTKLMK ELGYGRAYRY AHDEPEAYAA GERYFPDDIA EQQFYEPTPR
GLEGKIAEKL AHLRELDDEA EK
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