| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1491 |
|---|
| Symbol | |
|---|
| ID | 3672904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1578754 |
|---|
| End bp | 1581093 |
|---|
| Gene Length | 2340 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637710176 |
|---|
| Product | adenine specific DNA-methyltransferase |
|---|
| Protein accession | YP_315249 |
|---|
| Protein GI | 74317509 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2189] Adenine specific DNA methylase Mod |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00364069 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCC AGCCCAAGGA AGCCTACGAC CTGACGGACG CCGAAAAGCG CGATCTCATA
CAGTTGATTC AGGAAGGCAA AGCCTTGCCC GAGAAATACC GCTTCATCCT GTTCGAGGAC
AAGCGCGAAG TGGAACTGGT GTGGAACGGC AAGAGCCGCG AGGTCTGCAC CACCGTGCTG
CCATTTCAGT CGCTGGAGCA TGTGGACGAG CCGCGTCTGG AAAAACCGGA ACTCGGTACC
ATGGACCTGT TCGACACCCG CGGCCGCCAG CTTAAGGGCT GGACCAACAA GCTCATCTGG
GGTGATAACA AACTAATTCT TTCATCGCTT AAGAGCGGCG CGCTACGCCA GCAGATCGAG
GATGCAGGTG GCTTGAAGCT GATTTACATC GACCCGCCCT TCGATGTGGG AGCCGATTTC
TCTATGGACA TCGAGATCGG CGGCGAGACC TTCCACAAGG AGCCCAACCT GCTGGAACAG
ATAGCCTACC GCGACACTTG GGGGCGCGGG GCGGATTCCT TTATCTCGAT GGTCTATGAG
CGCTTGATTT TGATGCGGGA TTTGCTGGCG GACGATGGCT CAATATATGT ACACATGGGA
AAGACTGTTG CTCACTATGT CAGGCTTGCT TGTGAGGAGG TGTTTGGATC AGCGAACATC
GTCAATGAGA TTACGTGGAA GCGCTCTCAT GCACACGGAG ATACTGGCCA GGGGGCGTCC
CATTTTGGAA GGACTACCGA GACAATTCTT CTTTTCCGGA AGAGCGAAAA AGGGATATGG
AATCCACAAC ACAAACCCTA CACGGATGAC GTGCTCGCTA GGGATTACAA ATACACGGAA
GAAAAGACTG GCGAGCGGTA TCGTCTGATG CCAGTCGATG GCCCTGGCGG GGCGGCAAAA
GGTAACCCTT ATTACGATTT TCTGGGCGTT AAGGGCTATT GGCGGTATTC ATTTGAAACA
ATGACCAAGC TTTATGAGCA GGGTGAGATC GTACTTTCTT CAACCGGGAA GAGTCTTAGT
CGTAAGAAAT TCCTCAAAGA TGCGGAAGGC ACGCCGGTAG TCGATTTATG GGACGAAGTG
AACCGCATCA GTCCAACTTC GTCGGAGAGA CTAGACTACC CCACCCAAAA ACCAGAAGCT
CTGCTCGAAC GTATTATCAA AGCCAGTAGC AACGAAGGTG ATTTGGTGGC GGACTTTTTT
TGTGGCAGTG GTACGACCGC TGCAGTGGCA GAAAAGCTAG GCCGCAAGTG GATAGCAACC
GATCTCGGCA AGTTTGGTGT TCACACCACG CGCAAGCGCA TGATTGGGGT GCAGCGGCAA
CTGAAGGACT CCGGCAAGCC GTTCCGCGCC TTCGAGGTGT TGAACCTGGG TCGGTATGAG
CGCCAGGCTT ATCTCAATGT TGGTGGGCGC TTGAACGGCC ATCAGAAGGA ACAGCTACTG
GCACAAAAAG AGCGCGAGTT CCGTGATCTC ATCCTGCGCG CCTACAAGGC CCAGCCGCTG
GAGGGCGAAA GCTTCTTCCA TGGCAAGAAC GCGGGGCGGC TGGTCGTGAT CGGCCCCATC
AACCTGCCCG TGGGCCGGCT GTTCGTGGAG GAAGTCATCA CCGAGTGTCG CAAGCGCGGC
GCCTCGCGCG TGGACATGCT CGCCTTCGAG TTCGAGATGG GCCTGTTCCC GGCAGTGCTG
GAGGAGGCCA AGCAGAAGGG TATCGACCTG GTGCCAAAGC AGATTCCGCC CGAAGTGTTC
GACAAGCGCG CGGTCGAAAA AGGCCAGGTG GTGTTCTTCG ATATCAGCTT CGTCGAGGCC
ACGCCGCGCT ACGCCAAGAA AGACAAGTTC ACGCTGCAGA TCGAGCTGAC GGATTTTTCC
GTCTACTACA CCCAGGGCGC GGCCGAGGCC GCTGCCGCTA GCCTGAAAAA TGGCAAGAGC
CAGGTTGTTT GCGAACAAGG CCAGCTTATC AAGTTGAGCA AGGACAAGGA CGGCGTCGTC
ACCCGCGAGA TTCTTACCAA GAACTGGACC GACTGGGTGG ACTACTGGGC GGTGGACTTC
GACTACATGA GCCGCAAGGA AATCATCAAG GTCGCCAAGG GCGCAGGCAT TGACGGCAGC
CTTCCCGGCT TCGAGCCGCC GCAGGGCGAG TTGACCCTGC CGGAGTTCGA GGAACGCTGG
ACCGGCGGCT ACATCTTTGA AAACGAGTGG CAGAGCTTCC GCACCCGCAA GAGTCGCGAC
CTGGAAATGA TTTCCGCGCC GCACACCTAC ACCCAGGCTG GCCGCTATAC CGTGGCCGTA
AAGGTGATTG ATATCTTCGG CAACGACACC ATGGTGCTGG TGCCGGTGAG CGTGGGCTAA
|
|---|
| Protein sequence | MARQPKEAYD LTDAEKRDLI QLIQEGKALP EKYRFILFED KREVELVWNG KSREVCTTVL
PFQSLEHVDE PRLEKPELGT MDLFDTRGRQ LKGWTNKLIW GDNKLILSSL KSGALRQQIE
DAGGLKLIYI DPPFDVGADF SMDIEIGGET FHKEPNLLEQ IAYRDTWGRG ADSFISMVYE
RLILMRDLLA DDGSIYVHMG KTVAHYVRLA CEEVFGSANI VNEITWKRSH AHGDTGQGAS
HFGRTTETIL LFRKSEKGIW NPQHKPYTDD VLARDYKYTE EKTGERYRLM PVDGPGGAAK
GNPYYDFLGV KGYWRYSFET MTKLYEQGEI VLSSTGKSLS RKKFLKDAEG TPVVDLWDEV
NRISPTSSER LDYPTQKPEA LLERIIKASS NEGDLVADFF CGSGTTAAVA EKLGRKWIAT
DLGKFGVHTT RKRMIGVQRQ LKDSGKPFRA FEVLNLGRYE RQAYLNVGGR LNGHQKEQLL
AQKEREFRDL ILRAYKAQPL EGESFFHGKN AGRLVVIGPI NLPVGRLFVE EVITECRKRG
ASRVDMLAFE FEMGLFPAVL EEAKQKGIDL VPKQIPPEVF DKRAVEKGQV VFFDISFVEA
TPRYAKKDKF TLQIELTDFS VYYTQGAAEA AAASLKNGKS QVVCEQGQLI KLSKDKDGVV
TREILTKNWT DWVDYWAVDF DYMSRKEIIK VAKGAGIDGS LPGFEPPQGE LTLPEFEERW
TGGYIFENEW QSFRTRKSRD LEMISAPHTY TQAGRYTVAV KVIDIFGNDT MVLVPVSVG
|
|---|
| |