| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1471 |
|---|
| Symbol | |
|---|
| ID | 3673584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1555040 |
|---|
| End bp | 1557532 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637710156 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_315229 |
|---|
| Protein GI | 74317489 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGG CGATCAGCAA CCCCGCGGAC GACGTAGCCG ATTCGGCCAC GACCAAGCCC
CTCGTCCTGC TGACGGGCGC GACCGGCTTT CTCGGCCGCG CGCTCAGCGC CGCGCTGTCA
GCCGCGGGCT ATACGCTCGT CTGCCTCGAC CGCACGCCCA AGCAACTCGC CCACGCCGAA
AGCCTGCGCT GCGATCTGAC TTCGGACGAG AGCGTCGACG CCGCGCTGCG CGAGGTGAAG
CAACGTCATG GCACGCGCAT CGCCGCAGTC GTCCATCTGG CCGGTTATTA CGACTTCAGC
GGCGAGGCCA ACCCGCTCTA TCGCGCGGTC AACGTCGACG GCACGCGCCG CCTGCTGAAG
GCGCTGCAGG CATTCGAGGT CGAACAATTC GTCTACGCCT CGACGATGCT CGTGCACGCG
CCGACCACGC CGGGGGTGCC GATCGACGAA TCGTCGCCGC TCGCGCCGCG CTGGGCCTAT
CCGCAATCGA AGCTCGAGAC CGAAGCCGTC GTCGCCGAGG CGCACGGCGC GATTCCCTAC
GTGCTGCTGC GCATCGCCGG CGTCTACACG TCGGCGGTCC AGCCGCCGAC GCTGGCCCAC
CAGATCCGCT GGATCTACGA GCGCAAGCTC GAGGCCCGCC TCTTCCCCGG CGAGACCTCG
CACGGTCAGT CGTTCATCCA CATCGATGAT CTTTGCGACG CGCTGGTGCG CGTGGTGCAG
CGCCGGACCA GCTTGCCGCC CGACCTCGCG CTGCTGGTCG GCGAGCCCGT TCCGCTGAGC
TACGACGCGA CGCAAAACCG GCTCGGCACG CTGATCCACG GCGAACACTG GGAGACCGAG
ACCCTGCCCA AGCCTTTGGC CAAGGCCGGC GCCATGCTGC AGCGCACGCT CGAGACCGTC
GTTCCCGACT CGGTCGACCG CGGCGAGAAG CCCTTCGTCA AACCCTTCAT GGTCGAACTC
GCCGACGACC ATTACGAACT CGACGTCTCG CGCGCGCACG CGCTGCTCGG GTGGACGCCG
CGCCACAGCC TGCGCGACGA GCTGCCCGGC ATCGTTGCCG CGCTCAAGGC CGATCCACTC
GACTGGTACC GCGCCAACAA GATCCCGCCG CCCGAGTGGC TCGAGACCCT GACCGAGCAT
CCCGACGACG CGCACGCCTT GCTCGAGAAC GCCGAGACGA CGGCGCGAGG CCAGCACGCG
CAGTATCTCT GGGCGCATTT TCTCAACATC GGCCTCGGCC TGTGGCTGAT GTCGAGCCCG
CCGATCCTCG GCTATCCGGA TCAGGCGATG ACGCTGAACG ACGTCATCAG CGGCGCGCTC
GTCCTCATCT TCGGCACGCT TTCGCTGTCG CGGCACTTCG CCTGGGCACG GGTCGTCACC
GCGAGCGTCG GCGTATGGCT CTTGTTCGCG CCGCTCGTGT TCTGGGCGCC GACGGCCGCG
GGATATCTCA ACGACACGCT CGTCGGCGCG CTCGTGATCG GCTTTTCGAT GCTGGTCCCG
CCGACGCCGG GCGTCGGCGT CGCGGCGCGG ACGACCGGGC CCGATGTGCC GCCCGGATGG
GACTACACGC CCTCGGGCTG GACCCAGCGC ATTCCGATCA TCGCGCTCGC CTTCGTCGGC
CTCGCGATCT CGCGCTATCT CGCGGCCTAC CAGCTCGGCC ATACCGAAAG CGCCTGGGAC
CCCTTCTTCG GCGAGGGCAC CGAGCGCATC ATCACCTCCG AGGTGTCGCA GGCCTGGCCG
GTGCCCGACG CCGGCCTCGG CGCGACGACC TACATGCTCG AAATCCTCAC CGGCATCATC
GGCGGGCGCG CACGCTGGCG CACCATGCCC TGGCTCGTCG TCCTGTTCGG CGTCATGATC
GTGCCGCTCG GCGCGATCAG CCTGTTCTTC ATCATCATCC AGCCCATCGT CATCGGCACC
TGGTGCACGC TGTGCCTCGT CGCCGCCGCG GCCATGCTGC TGCAGATTCC GTATTCGCTC
GACGAACTCG TCGCCAGCGG CCAGTTTCTG CTCGACCGCC GGCGCCAGGG CAAGTCGCTG
ATCCTCGCTT TTTTCCGCGG CGACACGATG GAAGGCGGTG CGCGCACGCC CGGCGACGAC
TTCGAGCGCC CGGCGCGCGA GGTGCTCCGC GACATGCTCG GCGGCGGCGT CAACGCGCCG
TGGACCCTGC TCGCGAGCGC AGCGCTCGGC ATCTGGATGA TGTGTACGCG GCTCGTCTTC
GACACCGCGG GCGCGCAGGC CGACAGCGAC CACCTGCTCG GCGCACTCGT CATCACGGCA
TCGATCAGCG CGCTCGCCGA AGCCGCACGC CCGCTTCGCT TCGTCAATGC ACTGCTCGGC
ATCGCGCTGA TGTTCGCCCC CTTCATGTTC GACGGCGGCA GTCTCGTCGC CGACGCGGCC
GGCATCCTTG CCGGCCTGTT GCTGATCGCG CTCAGCATGC CGCGCGGTCG TATCGACAAC
CACTACGGGG CGTGGAGCCG CTATCTGCTC TGA
|
|---|
| Protein sequence | MGEAISNPAD DVADSATTKP LVLLTGATGF LGRALSAALS AAGYTLVCLD RTPKQLAHAE
SLRCDLTSDE SVDAALREVK QRHGTRIAAV VHLAGYYDFS GEANPLYRAV NVDGTRRLLK
ALQAFEVEQF VYASTMLVHA PTTPGVPIDE SSPLAPRWAY PQSKLETEAV VAEAHGAIPY
VLLRIAGVYT SAVQPPTLAH QIRWIYERKL EARLFPGETS HGQSFIHIDD LCDALVRVVQ
RRTSLPPDLA LLVGEPVPLS YDATQNRLGT LIHGEHWETE TLPKPLAKAG AMLQRTLETV
VPDSVDRGEK PFVKPFMVEL ADDHYELDVS RAHALLGWTP RHSLRDELPG IVAALKADPL
DWYRANKIPP PEWLETLTEH PDDAHALLEN AETTARGQHA QYLWAHFLNI GLGLWLMSSP
PILGYPDQAM TLNDVISGAL VLIFGTLSLS RHFAWARVVT ASVGVWLLFA PLVFWAPTAA
GYLNDTLVGA LVIGFSMLVP PTPGVGVAAR TTGPDVPPGW DYTPSGWTQR IPIIALAFVG
LAISRYLAAY QLGHTESAWD PFFGEGTERI ITSEVSQAWP VPDAGLGATT YMLEILTGII
GGRARWRTMP WLVVLFGVMI VPLGAISLFF IIIQPIVIGT WCTLCLVAAA AMLLQIPYSL
DELVASGQFL LDRRRQGKSL ILAFFRGDTM EGGARTPGDD FERPAREVLR DMLGGGVNAP
WTLLASAALG IWMMCTRLVF DTAGAQADSD HLLGALVITA SISALAEAAR PLRFVNALLG
IALMFAPFMF DGGSLVADAA GILAGLLLIA LSMPRGRIDN HYGAWSRYLL
|
|---|
| |